RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ASCC1Q8N9N2 400 aaKnown RBP11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 OR4S1Q8NGB4 309 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 CLDND2Q8NHS1 167 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 FCAMRQ8WWV6 532 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 THAP7Q9BT49 309 aaPredicted RBP11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 DPCDQ9BVM2 203 aaPredicted RBP11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 PECRQ9BY49 303 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 PPA2Q9H2U2 334 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 AUNIPQ9H7T9 357 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 ING3Q9NXR8 418 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 KCNK7Q9Y2U2 307 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 CSMD1Q96PZ7 3565 aa11.61□□□□□ -0.55
ATPAF2-208ENST00000496852 A0A096LNT2 108 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 K7N7A8 449 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 TK1P04183 234 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 CSN2P05814 226 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 CD3GP09693 182 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 HIST1H1DP16402 221 aaKnown RBP11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 OR3A1P47881 315 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 GNG2P59768 71 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 DGCR2P98153 550 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 BAK1Q16611 211 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 ZNF260Q3ZCT1 412 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 PAN3Q58A45 887 aaKnown RBP11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 ZNF57Q68EA5 555 aaPredicted RBP11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 BPIFB2Q8N4F0 458 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 NEIL1Q96FI4 390 aaPredicted RBP11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 SULT4A1Q9BR01 284 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 FAAP24Q9BTP7 215 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 CHST6Q9GZX3 395 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
ATPAF2-208ENST00000496852 IGHV4-61A0A0C4DH41 118 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 MEIOCA2RUB1 952 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 MCRIP1C9JLW8 97 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 DVL1O14640 695 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 LMO4P61968 165 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 RBM39Q14498 530 aaKnown RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 OLFML2AQ68BL7 652 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 OR52I2Q8NH67 350 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 ST8SIA4Q92187 359 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 MGST3O14880 152 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 NDUFB3O43676 98 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 UPK1BO75841 260 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 GSTP1P09211 210 aaKnown RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 KCNJ3P48549 501 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 SEC61A1P61619 476 aaKnown RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 MRPS10P82664 201 aaKnown RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 PAX5Q02548 391 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 ARL6IP1Q15041 203 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 GRK1Q15835 563 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 TRAPPC6BQ86SZ2 158 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 OR5D13Q8NGL4 314 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 Q96MF0 132 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 CHMP1AQ9HD42 196 aaPredicted RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 SLC25A10Q9UBX3 287 aaPredicted RBP11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 MED13LQ71F56 2210 aa11.59□□□□□ -0.55
ATPAF2-208ENST00000496852 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 SERPINE3A8MV23 424 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 GABARAPH6UMI1 98 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 CTDSPLO15194 276 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 RBBP9O75884 186 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 TPPPO94811 219 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 MELTFP08582 738 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 IL7P13232 177 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 ATXN7L3Q14CW9 347 aaPredicted RBP11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 WDR25Q64LD2 544 aaPredicted RBP11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 DYRK2Q92630 601 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 COQ2Q96H96 371 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
ATPAF2-208ENST00000496852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.562e-6■■■■□ 24.4
ATPAF2-208ENST00000496852 LANCL1O43813 399 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 CA11O75493 328 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 IL2RGP31785 369 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 NPY4RP50391 375 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 AESQ08117 197 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 PNLIPRP3Q17RR3 467 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 HACD4Q5VWC8 232 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 RSBN1Q5VWQ0 802 aaPredicted RBP11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 GAPTQ8N292 157 aa11.57□□□□□ -0.56
ATPAF2-208ENST00000496852 TOMM5Q8N4H5 51 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms