RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TRBV23-1A0A0A0MS06 115 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 KIAA1324LA8MWY0 1029 aaPredicted RBP18.02■□□□□ 0.48
C9orf3-222ENST00000496567 CA11O75493 328 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 EDDM3BP56851 147 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 PAX5Q02548 391 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 EDDM3AQ14507 147 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 TSC22D3Q99576 134 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 DCTN5Q9BTE1 182 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 PECRQ9BY49 303 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 ETAA1Q9NY74 926 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 MALRD1Q5VYJ5 2156 aa18.02■□□□□ 0.48
C9orf3-222ENST00000496567 CREBBPQ92793 2442 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 CTDSP2O14595 271 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 EIF4EP06730 217 aaKnown RBP18.01■□□□□ 0.47
C9orf3-222ENST00000496567 MSMBP08118 114 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 IGHV4-31P0DP07 118 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 AESQ08117 197 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 PLAC9Q5JTB6 97 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 KRBOX4Q5JUW0 171 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 SULT4A1Q9BR01 284 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 FAAP24Q9BTP7 215 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 LPAR3Q9UBY5 353 aa18.01■□□□□ 0.47
C9orf3-222ENST00000496567 UBE2QL1A1L167 161 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 FAM25AB3EWG3 89 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 FAM25CB3EWG5 89 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 FAM25GB3EWG6 89 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 HIST1H1DP16402 221 aaKnown RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 ELK1P19419 428 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 CDK2P24941 298 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 P2RX3P56373 397 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 RPL31P62899 125 aaKnown RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 LSAMPQ13449 338 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 C18orf12Q96KH6 178 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 LPAR2Q9HBW0 351 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 RPUSD1Q9UJJ7 312 aaKnown RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 PPIAL4CA0A0B4J2A2 164 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 SERPINE3A8MV23 424 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 XRCC3O43542 346 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 CLPXO76031 633 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 MEF2CQ06413 473 aaPredicted RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 RSBN1Q5VWQ0 802 aaPredicted RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 CYB5R2Q6BCY4 276 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 SLC35E4Q6ICL7 350 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 OR4M1Q8NGD0 313 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 C8orf46Q8TAG6 207 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 PLPPR1Q8TBJ4 325 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 MSI2Q96DH6 328 aaKnown RBP18■□□□□ 0.47
C9orf3-222ENST00000496567 COQ2Q96H96 371 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 DMRTB1Q96MA1 342 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 NCOR1P1Q9H4R4 102 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 ING3Q9NXR8 418 aa18■□□□□ 0.47
C9orf3-222ENST00000496567 YLPM1P49750 1951 aaKnown RBP17.99■□□□□ 0.47
C9orf3-222ENST00000496567 TMEM30CPA0ZSE6 113 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 C22orf46C9J442 243 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 ENSAO43768 121 aaKnown RBP17.99■□□□□ 0.47
C9orf3-222ENST00000496567 GNB3P16520 340 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 GLIPR1P48060 266 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 CDNFQ49AH0 187 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 ZNF497Q6ZNH5 498 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 LAX1Q8IWV1 398 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 TPRX1Q8N7U7 411 aa17.99■□□□□ 0.47
C9orf3-222ENST00000496567 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.99■□□□□ 0.47
C9orf3-222ENST00000496567 TRAV18A0A075B6X5 111 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 TRAV20A0A0B4J274 112 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 A0A1W2PQ09 198 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 hADV38S2A0JD32 116 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 ODAMA1E959 279 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 MFNGO00587 321 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 LIPFP07098 398 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 GSTP1P09211 210 aaKnown RBP17.98■□□□□ 0.47
C9orf3-222ENST00000496567 PPIAL4GP0DN37 164 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 S100A5P33763 92 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 TALDO1P37837 337 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 TMEM69Q5SWH9 247 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 FAM185AQ8N0U4 392 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 LY6G5BQ8NDX9 201 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 MIXL1Q9H2W2 232 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 RIMS4Q9H426 269 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-222ENST00000496567 C19orf12Q9NSK7 152 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 KIF25Q9UIL4 384 aa17.98■□□□□ 0.47
C9orf3-222ENST00000496567 FLNAP21333 2647 aaKnown RBP17.97■□□□□ 0.47
C9orf3-222ENST00000496567 MEIKINA0A087WXM9 373 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 IGHV2-70DA0A0C4DH43 119 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 A0A1W2PPH5 198 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 TGFAP01135 160 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 INHBBP09529 407 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 CD99P14209 185 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 MRPS15P82914 257 aaKnown RBP17.97■□□□□ 0.47
C9orf3-222ENST00000496567 ZNF260Q3ZCT1 412 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 BTNL3Q6UXE8 466 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 RTN4RL2Q86UN3 420 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 GLCCI1Q86VQ1 547 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 GAPTQ8N292 157 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 TMEM186Q96B77 213 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 TMUB1Q9BVT8 246 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 ZMAT3Q9HA38 289 aaKnown RBP17.97■□□□□ 0.47
C9orf3-222ENST00000496567 OR6C3Q9NZP0 311 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 AK3Q9UIJ7 227 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 KCNK7Q9Y2U2 307 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 LINC00312Q9Y6C7 94 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms