RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MKI67P46013 3256 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 IGKV1D-8A0A087WSZ0 117 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 KRBOX1C9JBD0 128 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 DFFAO00273 331 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 FGF16O43320 207 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 MBTPS2O43462 519 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 UPK1BO75841 260 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SLC22A5O76082 557 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 MPZL1O95297 269 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 UTS2O95399 124 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 HLA-AP01891 365 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 KLK3P07288 261 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 GNAO1P09471 354 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 OR4E1P0C645 316 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 IL7P13232 177 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 RCC1P18754 421 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 HSD11B1P28845 292 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 CRABP1P29762 137 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 GPX4P36969 197 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 CAPZBP47756 277 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SERPINB10P48595 397 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SERPINB9P50453 376 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ERVS71-1P61550 626 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ARF6P62330 175 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 PAFAH1B2P68402 229 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 HMGCS1Q01581 520 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SLC25A11Q02978 314 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 PRKCDQ05655 676 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 CYP24A1Q07973 514 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 STX4Q12846 297 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 RAB31Q13636 194 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 TFDP2Q14188 446 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SMCO1Q147U7 214 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 HSD17B12Q53GQ0 312 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 WDR59Q6PJI9 974 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 DRAM2Q6UX65 266 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SLC13A5Q86YT5 568 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 NRMQ8IXM6 262 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 C4orf33Q8N1A6 199 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 Q8N402 240 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 FTMTQ8N4E7 242 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 EIF4E3Q8N5X7 224 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 OR6Q1Q8NGQ2 317 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 OR5P2Q8WZ92 322 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 RCN3Q96D15 328 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ZHX1-C8orf76Q96EF9 292 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ADTRPQ96IZ2 230 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 BTN2A3PQ96KV6 586 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 COL21A1Q96P44 957 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SCGB3A2Q96PL1 93 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 POLR2J2Q9GZM3 115 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 METTL9Q9H1A3 318 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 POLR2J3Q9H1A7 115 aaKnown RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 MYOZ1Q9NP98 299 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ZDHHC4Q9NPG8 344 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 MED9Q9NWA0 146 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 BABAM2Q9NXR7 383 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 PSG11Q9UQ72 335 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 SLC22A13Q9Y226 551 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 ASF1AQ9Y294 204 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 IGHV1OR21-1A0A087WYE8 117 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF816-ZNF321PA0A0X1KG74 233 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 A0A1W2PQL4 384 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-212ENST00000496458 A6NDN8 102 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 C9J4A7 227 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 H0Y980 276 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 I3L521 148 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 J3QLI3 93 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 K7EMT4 169 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 M0R036 132 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 NME4O00746 187 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 PHYHO14832 338 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 FAM189A1O60320 539 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ICOSLGO75144 302 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 GCGP01275 180 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 IFNA10P01566 189 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ARG1P05089 322 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 OR8U9P0C7N5 309 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ZDHHC11BP0C7U3 371 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 GIMD1P0DJR0 217 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 LIPCP11150 499 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
SF3B1-212ENST00000496458 SPI1P17947 270 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 RAB5AP20339 215 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 PRPS1L1P21108 318 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 CASP1P29466 404 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 RPL35P42766 123 aaKnown RBP3.34□□□□□ -1.87
SF3B1-212ENST00000496458 AKR1D1P51857 326 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 SUB1P53999 127 aaKnown RBP eCLIP3.34□□□□□ -1.87
SF3B1-212ENST00000496458 DEFA1P59665 94 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 DEFA3P59666 94 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 CXCR4P61073 352 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 DEFA6Q01524 100 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 SEMG2Q02383 582 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 GNA12Q03113 381 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ARFRP1Q13795 201 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 OR7A5Q15622 319 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF726P1Q15940 193 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms