RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RAI1Q7Z5J4 1906 aaPredicted RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 PLSCR5A0PG75 271 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ZNF503-AS2A6NEH8 195 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 OR5H1A6NKK0 313 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 EEF1E1-BLOC1S5C9J1V9 151 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 SH2D1BO14796 132 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 B3GALNT1O75752 331 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 IGKV3-15P01624 115 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 CA6P23280 308 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 PSMB6P28072 239 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 SSTR2P30874 369 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 OPRM1P35372 400 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 TIMP3P35625 211 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 SERPINF1P36955 418 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 KIR2DL2P43627 348 aaPredicted RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 H2BFSP57053 126 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 FXYD4P59646 89 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 EXOSC2Q13868 293 aaKnown RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 LRRC37A5PQ49AS3 106 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 SPIN3Q5JUX0 258 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 TIMM23BQ5SRD1 257 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 SPATA46Q5T0L3 261 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 RGS7BPQ6MZT1 257 aaPredicted RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 TMEM65Q6PI78 240 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ACOT7LQ6ZUV0 252 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 CXorf67Q86X51 503 aaPredicted RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 LGI3Q8N145 548 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ADAD2Q8NCV1 583 aaKnown RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 GALNT11Q8NCW6 608 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ZNF680Q8NEM1 530 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 OR8G5Q8NG78 346 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 OR11H4Q8NGC9 324 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 FAM57AQ8TBR7 257 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 PPP1R1CQ8WVI7 109 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 MAFIPQ8WZ33 124 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 CCDC120Q96HB5 630 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 OR2J1Q9GZK6 312 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 CXXC4Q9H2H0 198 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 C5orf66Q9H5L9 145 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 IFT22Q9H7X7 185 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ZC4H2Q9NQZ6 224 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 TREM2Q9NZC2 230 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 RCC2Q9P258 522 aaKnown RBP5.92□□□□□ -1.46
USP39-219ENST00000496047 PFDN2Q9UHV9 154 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 NBEAQ8NFP9 2946 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 ITPR1Q14643 2758 aa5.92□□□□□ -1.46
USP39-219ENST00000496047 TRBV6-6A0A0A6YYG2 114 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 DUXBA0A1W2PPF3 345 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 A0A1W2PR80 420 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 CRYM-AS1A6NIL9 109 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 A6NLC8 198 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 TRDCB7Z8K6 153 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 CCSO14618 274 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 BCL2L11O43521 198 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 NXPH2O95156 264 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 CRYAAP02489 173 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 KITLGP21583 273 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 FCGR2CP31995 323 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 NPBWR2P48146 333 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 KCNJ3P48549 501 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 PIGPP57054 158 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 TMPRSS3P57727 454 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 HLA-DRB3P79483 266 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 BAMBIQ13145 260 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 PAN3Q58A45 887 aaKnown RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 CLLU1Q5K131 121 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 LY6G6FQ5SQ64 297 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 AADACL3Q5VUY0 350 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 DCAF12L2Q5VW00 463 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 SHEQ5VZ18 495 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 THOC7Q6I9Y2 204 aaKnown RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 SIGIRRQ6IA17 410 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 TRAT1Q6PIZ9 186 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 DHRS11Q6UWP2 260 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 CLEC18BQ6UXF7 455 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 CMTM1Q8IZ96 169 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 RBMXL3Q8N7X1 1067 aaKnown RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 SUMF2Q8NBJ7 301 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 OR4A4PQ8NGN8 299 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 LRRC20Q8TCA0 184 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 SCARB1Q8WTV0 552 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 DCUN1D4Q92564 292 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 MOB3AQ96BX8 217 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 WDR89Q96FK6 387 aaPredicted RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 KIRREL1Q96J84 757 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 C2orf50Q96LR7 162 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 ZNF75AQ96N20 296 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 TAAR6Q96RI8 345 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 ARPC5LQ9BPX5 153 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 HDHD3Q9BSH5 251 aaPredicted RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 DNTTIP1Q9H147 329 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 OPN3Q9H1Y3 402 aaPredicted RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 OR51I2Q9H344 312 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 NAA60Q9H7X0 242 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 Q9N2K0 584 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 RAB9BQ9NP90 201 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 KCNIP1Q9NZI2 227 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms