RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NANOGP8Q6NSW7 305 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 CGB2Q6NT52 195 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ERICH5Q6P6B1 374 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ARL9Q6T311 187 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 WDR86Q86TI4 376 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 FAM89BQ8N5H3 189 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 OR8G5Q8NG78 346 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 OR51A7Q8NH64 312 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 OR1F12Q8NHA8 337 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 FCAMRQ8WWV6 532 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 RASSF5Q8WWW0 418 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ACOT11Q8WXI4 607 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 DYRK2Q92630 601 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 HIST1H2ACQ93077 130 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 APOBEC3DQ96AK3 386 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 NSL1Q96IY1 281 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 PLEKHA8Q96JA3 519 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ST6GAL2Q96JF0 529 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ECSITQ9BQ95 431 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ADAT1Q9BUB4 502 aaKnown RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 BEX1Q9HBH7 125 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ZNRD1Q9P1U0 126 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 CLN8Q9UBY8 286 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 VPREB3Q9UKI3 123 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ELF5Q9UKW6 265 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 SIGLEC7Q9Y286 467 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 NDUFAF1Q9Y375 327 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 DOCK11Q5JSL3 2073 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 PLXNB1O43157 2135 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 SAA2-SAA4A0A096LPE2 208 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 RBMY1BA6NDE4 496 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 RBMY1EA6NEQ0 496 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 BBIP1A8MTZ0 92 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 ZNF879B4DU55 563 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 PRAC2D3DTV9 90 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 K7EQM0 130 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 P2RY10O00398 339 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 MRASO14807 208 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 SURF4O15260 269 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 OR10H3O60404 316 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 SLC16A7O60669 478 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 EDF1O60869 148 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 HLA-DPB1P04440 258 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 RBMY1DP0C7P1 496 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 S100A5P33763 92 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 GGT2P36268 569 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 YAP1P46937 504 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 OMPP47874 163 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 SRP9P49458 86 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 HOXA1P49639 335 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 PSMD7P51665 324 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 DLX1P56177 255 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 ELF3P78545 371 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 ST3GAL3Q11203 375 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 KLRD1Q13241 179 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 TRAM2Q15035 370 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 PCK2Q16822 640 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 SNAI3Q3KNW1 292 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 AGBL2Q5U5Z8 902 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 C1orf94Q6P1W5 598 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 METAP1DQ6UB28 335 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 ZNF620Q6ZNG0 422 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 MBOAT2Q6ZWT7 520 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 OAFQ86UD1 273 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 FAM86B1Q8N7N1 296 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 ZSCAN4Q8NAM6 433 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 CCDC197Q8NCU1 140 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 OR13G1Q8NGZ3 307 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 FAM81AQ8TBF8 368 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 FANK1Q8TC84 345 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 SLC7A13Q8TCU3 470 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 HPSE2Q8WWQ2 592 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 NDUFAF3Q9BU61 184 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 VCX3BQ9H321 246 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 ANKRD19PQ9H560 264 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 C16orf95Q9H693 158 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 VIPAS39Q9H9C1 493 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 NMNAT1Q9HAN9 279 aaPredicted RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 TNFRSF19Q9NS68 423 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 INTS9Q9NV88 658 aaKnown RBP3.39□□□□□ -1.87
VPS52-222ENST00000495981 NECAP2Q9NVZ3 263 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
VPS52-222ENST00000495981 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 LRRC30A6NM36 301 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 RNASEK-C17orf49H0YIS7 233 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 C3orf84H3BNL1 204 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 NME4O00746 187 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 CHST1O43916 411 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 NDUFB2O95178 105 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 ZNF682O95780 498 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 SEMG1P04279 462 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 IFNW1P05000 195 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 GP9P14770 177 aa3.38□□□□□ -1.87
VPS52-222ENST00000495981 RPA2P15927 270 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms