RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 TIMP3P35625 211 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 UCP2P55851 309 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 PIGPP57054 158 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 RND3P61587 244 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 RPS23P62266 143 aaKnown RBP7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ZNF718Q3SXZ3 478 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 FAM76BQ5HYJ3 339 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ZNF660Q6AZW8 331 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-213ENST00000495693 HAGHLQ6PII5 290 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-213ENST00000495693 RNF144BQ7Z419 303 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 CALHM1Q8IU99 346 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 OR4A4PQ8NGN8 299 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 LILRB1Q8NHL6 650 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-213ENST00000495693 STOML3Q8TAV4 291 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 DCUN1D4Q92564 292 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 SLAMF9Q96A28 289 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 TMEM230Q96A57 120 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ABHD14BQ96IU4 210 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ZNF75AQ96N20 296 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 SFXN3Q9BWM7 321 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 DNTTIP1Q9H147 329 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ZNF230Q9UIE0 474 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-213ENST00000495693 TMED3Q9Y3Q3 217 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 ATP23Q9Y6H3 246 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 TRIOO75962 3097 aa7.35□□□□□ -1.23
EPHA4-213ENST00000495693 NCOA6Q14686 2063 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-213ENST00000495693 TRDCB7Z8K6 153 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 EEF1E1-BLOC1S5C9J1V9 151 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 NPIPB11E5RHQ5 1161 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 SDCBPO00560 298 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-213ENST00000495693 CDS2O95674 445 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 NAPSAO96009 420 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 RRASP10301 218 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 PRKACAP17612 351 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 BCL3P20749 454 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 FCGR2CP31995 323 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 WNT5AP41221 380 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 IDH3GP51553 393 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-213ENST00000495693 PMP22Q01453 160 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 SLC9A3R2Q15599 337 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 OR8G1Q15617 311 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 C2orf68Q2NKX9 166 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 FAM180AQ6UWF9 173 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 OR5T2Q8NGG2 359 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 OR5M9Q8NGP3 310 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 OR1J1Q8NGS3 322 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 RTN4IP1Q8WWV3 396 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-213ENST00000495693 ST8SIA2Q92186 375 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 IL22RA2Q969J5 263 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 ADAT1Q9BUB4 502 aaKnown RBP7.34□□□□□ -1.23
EPHA4-213ENST00000495693 OR51I2Q9H344 312 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 PIGMQ9H3S5 423 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 FN3KRPQ9HA64 309 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 PLEKHA2Q9HB19 425 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 Q9N2K0 584 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 RAB9BQ9NP90 201 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 TMEM100Q9NV29 134 aa7.34□□□□□ -1.23
EPHA4-213ENST00000495693 RPS10-NUDT3A0A1W2PQS6 291 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 C22orf46C9J442 243 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 KRBOX1C9JBD0 128 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 F5H0A9 414 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 GPR31O00270 319 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 SH2D1BO14796 132 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 NGFP01138 241 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 PPYP01298 95 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 IGLV1-44P01699 117 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 CCL2P13500 99 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 RPS2P15880 293 aaKnown RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 PI3P19957 117 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 PVALBP20472 110 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 KITLGP21583 273 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 GLRA1P23415 457 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 IL32P24001 234 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 DUSP1P28562 367 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 OPRM1P35372 400 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 FOXG1P55316 489 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 SUPT4H1P63272 117 aaKnown RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 HLA-DRB3P79483 266 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 ZNF146Q15072 292 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 LRRC37A5PQ49AS3 106 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 TIMM23BQ5SRD1 257 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 C1orf185Q5T7R7 199 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 MBNL2Q5VZF2 373 aaKnown RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 THOC7Q6I9Y2 204 aaKnown RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 ZNF585AQ6P3V2 769 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 TRAT1Q6PIZ9 186 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 LCNL1Q6ZST4 164 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 BHLHA15Q7RTS1 189 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 OR8G5Q8NG78 346 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 PPP1R35Q8TAP8 253 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 TOMM40LQ969M1 308 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 MUCL1Q96DR8 90 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 SEC22AQ96IW7 307 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 AKR1E2Q96JD6 320 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 AQP10Q96PS8 301 aa7.33□□□□□ -1.24
EPHA4-213ENST00000495693 ZNF471Q9BX82 626 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-213ENST00000495693 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms