RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BTBD17A6NE02 478 aa13□□□□□ -0.33
LIME1-209ENST00000494776 CRTAPO75718 401 aaPredicted RBP13□□□□□ -0.33
LIME1-209ENST00000494776 SC5DO75845 299 aa13□□□□□ -0.33
LIME1-209ENST00000494776 ARL6IP5O75915 188 aa13□□□□□ -0.33
LIME1-209ENST00000494776 CLPXO76031 633 aa13□□□□□ -0.33
LIME1-209ENST00000494776 UCHL1P09936 223 aa13□□□□□ -0.33
LIME1-209ENST00000494776 GABRA5P31644 462 aa13□□□□□ -0.33
LIME1-209ENST00000494776 KCNJ3P48549 501 aa13□□□□□ -0.33
LIME1-209ENST00000494776 DYNC1I2Q13409 638 aaKnown RBP13□□□□□ -0.33
LIME1-209ENST00000494776 MPV17LQ2QL34 196 aa13□□□□□ -0.33
LIME1-209ENST00000494776 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
LIME1-209ENST00000494776 C16orf87Q6PH81 154 aa13□□□□□ -0.33
LIME1-209ENST00000494776 TMEM86BQ8N661 226 aa13□□□□□ -0.33
LIME1-209ENST00000494776 SUMF2Q8NBJ7 301 aa13□□□□□ -0.33
LIME1-209ENST00000494776 NEK7Q8TDX7 302 aa13□□□□□ -0.33
LIME1-209ENST00000494776 COQ2Q96H96 371 aa13□□□□□ -0.33
LIME1-209ENST00000494776 DPCDQ9BVM2 203 aaPredicted RBP13□□□□□ -0.33
LIME1-209ENST00000494776 OR6C3Q9NZP0 311 aa13□□□□□ -0.33
LIME1-209ENST00000494776 LRRC42Q9Y546 428 aa13□□□□□ -0.33
LIME1-209ENST00000494776 POMT1Q9Y6A1 747 aa13□□□□□ -0.33
LIME1-209ENST00000494776 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
LIME1-209ENST00000494776 MEIKINA0A087WXM9 373 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 ARG1P05089 322 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 CRYBA1P05813 215 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
LIME1-209ENST00000494776 TAF9Q16594 264 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 C12orf54Q6X4T0 127 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 TMEM91Q6ZNR0 172 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 LRRTM1Q86UE6 522 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 ZNF565Q8N9K5 539 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 CORO2AQ92828 525 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 MRPS24Q96EL2 167 aaKnown RBP12.99□□□□□ -0.33
LIME1-209ENST00000494776 SELENOIQ9C0D9 397 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
LIME1-209ENST00000494776 BANF2Q9H503 90 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 TAS2R3Q9NYW6 316 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
LIME1-209ENST00000494776 IGHV4-59P01825 116 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 UBBP0CG47 229 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 MGMTP16455 207 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
LIME1-209ENST00000494776 PSMB9P28065 219 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 GLP1RP43220 463 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 IER3P46695 156 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 FABP5Q01469 135 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 PRAMEF5Q5TYX0 476 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 OR52W1Q6IF63 320 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 SPARTQ8N0X7 666 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 FAM46BQ96A09 425 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 CHIAQ9BZP6 476 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 CST11Q9H112 138 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 SPACA1Q9HBV2 294 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 ZNRD1Q9P1U0 126 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 KIF25Q9UIL4 384 aa12.98□□□□□ -0.33
LIME1-209ENST00000494776 TMEM89A2RUT3 159 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 ZNF729A6NN14 1252 aaPredicted RBP12.97□□□□□ -0.33
LIME1-209ENST00000494776 CDK2P24941 298 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 HTR2CP28335 458 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 BRICD5Q6PL45 260 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 FCGR1BQ92637 280 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 ZNF581Q9P0T4 197 aa12.97□□□□□ -0.33
LIME1-209ENST00000494776 FBN3Q75N90 2809 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 IGHV2-26A0A0B4J1V2 119 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 FAM181BA6NEQ2 426 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 MCRIP1C9JLW8 97 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 CCRL2O00421 344 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 MPIG6BO95866 241 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 HKR1P10072 659 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 OMGP23515 440 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 FOXL1Q12952 345 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 RBM39Q14498 530 aaKnown RBP12.96□□□□□ -0.33
LIME1-209ENST00000494776 SSX1Q16384 188 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 UBE2UQ5VVX9 321 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.33
LIME1-209ENST00000494776 ZNF773Q6PK81 442 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 HEPN1Q6WQI6 88 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 TMEM104Q8NE00 496 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 PLPPR1Q8TBJ4 325 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 C17orf50Q8WW18 174 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 NCOR1P1Q9H4R4 102 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 NDUFB11Q9NX14 153 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
LIME1-209ENST00000494776 TBL2Q9Y4P3 447 aaKnown RBP12.96□□□□□ -0.33
LIME1-209ENST00000494776 PEX16Q9Y5Y5 336 aa12.96□□□□□ -0.33
LIME1-209ENST00000494776 KBTBD11-OT1A0A1B0GTJ5 212 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 TMEM30CPA0ZSE6 113 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 H3BUI4 141 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 MMP23AO75900 390 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 NFYBP25208 207 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 ZNF626Q68DY1 528 aa12.95□□□□□ -0.34
LIME1-209ENST00000494776 SLC35E4Q6ICL7 350 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms