RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 UCP3P55916 312 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 SPIN3Q5JUX0 258 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 PDCD10Q9BUL8 212 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 TMEM165Q9HC07 324 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 DUSP13Q9UII6 198 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 SPEF1Q9Y4P9 236 aa13.97□□□□□ -0.17
ATG4B-225ENST00000494465 FXYD6-FXYD2A0A087WZ82 144 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 SIRPB1O00241 398 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 ARPC5O15511 151 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 ADAP1O75689 374 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 PPYP01298 95 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 SERPINF1P36955 418 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 GLP1RP43220 463 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 PIGPP57054 158 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 PAN3Q58A45 887 aaKnown RBP13.96□□□□□ -0.17
ATG4B-225ENST00000494465 SHEQ5VZ18 495 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 GAPTQ8N292 157 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 COQ8AQ8NI60 647 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 PLPPR1Q8TBJ4 325 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 RAB18Q9NP72 206 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 TREM2Q9NZC2 230 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 PLCE1Q9P212 2302 aa13.96□□□□□ -0.17
ATG4B-225ENST00000494465 KIR2DS1A0A191URI9 304 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 FAM25EA8MYX2 175 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 C16orf97H3BN30 126 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 RCC1P18754 421 aaPredicted RBP13.96□□□□□ -0.18
ATG4B-225ENST00000494465 CD40P25942 277 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 KIR2DS4P43632 304 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 KIR2DS1Q14954 304 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 TEX261Q6UWH6 196 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 PPP1R1CQ8WVI7 109 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 DMRTA2Q96SC8 542 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 UFSP2Q9NUQ7 469 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 U3KQ87 197 aa13.96□□□□□ -0.18
ATG4B-225ENST00000494465 IGLV3-9A0A075B6K5 115 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 ZSCAN5BA6NJL1 495 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 A6NLC8 198 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 MPTX1A8MV57 137 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 PTBP3O95758 552 aaKnown RBP13.95□□□□□ -0.18
ATG4B-225ENST00000494465 IFNA2P01563 188 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 RBMXP38159 391 aaKnown RBP13.95□□□□□ -0.18
ATG4B-225ENST00000494465 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-225ENST00000494465 NDUFA5Q16718 116 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 ZNF497Q6ZNH5 498 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 RSRP1Q9BUV0 290 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 L7N2F9 121 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 SH2D1BO14796 132 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 TUSC2O75896 110 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 HAND1O96004 215 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 MDH2P40926 338 aaKnown RBP13.95□□□□□ -0.18
ATG4B-225ENST00000494465 RBPJQ06330 500 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 OPCMLQ14982 345 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 ZNF767PQ75MW2 155 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 SGPP2Q8IWX5 399 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 SYT3Q9BQG1 590 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 SLC2A9Q9NRM0 540 aa13.95□□□□□ -0.18
ATG4B-225ENST00000494465 BET1O15155 118 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 SNAPC5O75971 98 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 C1QTNF9P0C862 333 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 LMO1P25800 156 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 CD200P41217 278 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 KCNJ3P48549 501 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-225ENST00000494465 FGL1Q08830 312 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 VHLLQ6RSH7 139 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 GSG1LQ6UXU4 331 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 SLC38A6Q8IZM9 456 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 OR8H1Q8NGG4 311 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 USB1Q9BQ65 265 aaKnown RBP13.94□□□□□ -0.18
ATG4B-225ENST00000494465 RASL12Q9NYN1 266 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 C13orf42A0A1B0GVH6 325 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 C5orf51A6NDU8 294 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 PSPNO60542 156 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 TK1P04183 234 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 THBDP07204 575 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 SLC25A4P12235 298 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 RPA2P15927 270 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 HERV-K104P61576 105 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 LRRC37A5PQ49AS3 106 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 SPRNQ5BIV9 151 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 C11orf87Q6NUJ2 197 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 TMEM65Q6PI78 240 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 ZNF680Q8NEM1 530 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 OR5T2Q8NGG2 359 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 OR11L1Q8NGX0 322 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 RTN4IP1Q8WWV3 396 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-225ENST00000494465 VKORC1Q9BQB6 163 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 NMES1Q9C002 83 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 ITGB1BP2Q9UKP3 347 aa13.94□□□□□ -0.18
ATG4B-225ENST00000494465 POLEQ07864 2286 aa13.93□□□□□ -0.18
ATG4B-225ENST00000494465 TEX13DA0A0J9YY54 714 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-225ENST00000494465 POM121CA8CG34 1229 aa13.93□□□□□ -0.18
ATG4B-225ENST00000494465 M0R233 179 aa13.93□□□□□ -0.18
ATG4B-225ENST00000494465 HLA-DRB3P79483 266 aa13.93□□□□□ -0.18
ATG4B-225ENST00000494465 PHLDA2Q53GA4 152 aa13.93□□□□□ -0.18
ATG4B-225ENST00000494465 TMUB2Q71RG4 321 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms