RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C10orf35Q96D05 121 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 S100A16Q96FQ6 103 aaKnown RBP10.87□□□□□ -0.67
ERCC3-209ENST00000494464 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-209ENST00000494464 PLEKHA1Q9HB21 404 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 GPR173Q9NS66 373 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 RHBDL2Q9NX52 303 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 RASL12Q9NYN1 266 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 POLDIP2Q9Y2S7 368 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 IGKV1D-17A0A075B6S4 117 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 MDFIC2A0A1B0GVS7 189 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 PSG2P11465 335 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 RAB3AP20336 220 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 HTR2CP28335 458 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 BDKRB2P30411 391 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 HAAOP46952 286 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 POU3F4P49335 361 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 INPP1P49441 399 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 ARF6P62330 175 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 MADCAM1Q13477 382 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 SLC9A3R2Q15599 337 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 DEFB112Q30KQ8 113 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 RUSC1-AS1Q66K80 236 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 MZT2BQ6NZ67 158 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 OR51A2Q8NGJ7 313 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 OR5D14Q8NGL3 314 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 PTX4Q96A99 478 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 FAM3DQ96BQ1 224 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 FGGYQ96C11 551 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-209ENST00000494464 SDSLQ96GA7 329 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 DUX5Q96PT3 197 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 UQCC2Q9BRT2 126 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 THAP7Q9BT49 309 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-209ENST00000494464 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 TMEM138Q9NPI0 162 aa10.86□□□□□ -0.67
ERCC3-209ENST00000494464 RBFOX1Q9NWB1 397 aaKnown RBP10.86□□□□□ -0.67
ERCC3-209ENST00000494464 SLC25A10Q9UBX3 287 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-209ENST00000494464 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-209ENST00000494464 TENM1Q9UKZ4 2725 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 LDLRAD4O15165 306 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 LYRM1O43325 122 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 AWAT1Q58HT5 328 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 TMEM69Q5SWH9 247 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 VMO1Q7Z5L0 202 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF554Q86TJ5 538 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 TMEM86BQ8N661 226 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 CHAC2Q8WUX2 184 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 LHX4Q969G2 390 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 C7orf50Q9BRJ6 194 aaKnown RBP10.85□□□□□ -0.67
ERCC3-209ENST00000494464 PKIBQ9C010 78 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 ONECUT1Q9UBC0 465 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 MAB21L2Q9Y586 359 aa10.85□□□□□ -0.67
ERCC3-209ENST00000494464 TRBV23-1A0A0A0MS06 115 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 A0A0A6YYH2 397 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 A6NIN4 97 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 A6NJ64 397 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 GABARAPH6UMI1 98 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
ERCC3-209ENST00000494464 XRCC3O43542 346 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 SYNGR1O43759 233 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 ALX3O95076 343 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 TFF1P04155 84 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 ALDOBP05062 364 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 RAB6AP20340 208 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 GABRA2P47869 451 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 TAS2R20P59543 309 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 FOXL1Q12952 345 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 CADM3Q8N126 398 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 DUSP18Q8NEJ0 188 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 OR51D1Q8NGF3 324 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 PP6455Q8WZ26 134 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 H1FXQ92522 213 aaKnown RBP10.84□□□□□ -0.67
ERCC3-209ENST00000494464 NRIP2Q9BQI9 281 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 SLC7A11Q9UPY5 501 aa10.84□□□□□ -0.67
ERCC3-209ENST00000494464 TMEM272A0A1B0GTI8 110 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 M0R1W7 72 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ARSBP15848 533 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 NDUFB7P17568 137 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 CDK2P24941 298 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 DGCR2P98153 550 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 IL24Q13007 206 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 UBE2V2Q15819 145 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 C2orf76Q3KRA6 126 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF57Q68EA5 555 aaPredicted RBP10.83□□□□□ -0.68
ERCC3-209ENST00000494464 Q6YL49 198 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 C1orf122Q6ZSJ8 110 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 UTS2BQ765I0 119 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 CALHM1Q8IU99 346 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 ZNF561Q8N587 486 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 JAGN1Q8N5M9 183 aa10.83□□□□□ -0.68
ERCC3-209ENST00000494464 Q8N7P7 452 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms