RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SLC38A6Q8IZM9 456 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 KCNRGQ8N5I3 272 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 CISD2Q8N5K1 135 aaKnown RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 GALNT14Q96FL9 552 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SEC22AQ96IW7 307 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 NMES1Q9C002 83 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 MFFQ9GZY8 342 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ARL6Q9H0F7 186 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 RIMS4Q9H426 269 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SLC2A9Q9NRM0 540 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 TMEM100Q9NV29 134 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 UBQLN2Q9UHD9 624 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF835Q9Y2P0 537 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ANKRD11Q6UB99 2663 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ACACAQ13085 2346 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 TRBV6-7A0A0A0MS04 114 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 A0A0G2JNJ9 132 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 IGHV3-64DA0A0J9YX35 117 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 PRRG2O14669 202 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 CDIPTO14735 213 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 BCL2L11O43521 198 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 NXPH2O95156 264 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 IFNA7P01567 189 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 GRPP07492 148 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 ACAA1P09110 424 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-208ENST00000494028 OR5AC1P0C628 307 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 LYL1P12980 280 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 S100A1P23297 94 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 GCH1P30793 250 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-208ENST00000494028 RBM39Q14498 530 aaKnown RBP9.01□□□□□ -0.97
CLCN6-208ENST00000494028 TMEM187Q14656 261 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 PHLDA2Q53GA4 152 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 RGS7BPQ6MZT1 257 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-208ENST00000494028 GFRALQ6UXV0 394 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF826PQ6ZT77 177 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 MRGPRGQ86SM5 289 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 C1orf174Q8IYL3 243 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 GAPTQ8N292 157 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 OR11L1Q8NGX0 322 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 PIGMQ9H3S5 423 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 C1orf123Q9NWV4 160 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 RASL12Q9NYN1 266 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 Q9UFV3 132 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 ATP23Q9Y6H3 246 aa9.01□□□□□ -0.97
CLCN6-208ENST00000494028 RAI1Q7Z5J4 1906 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-208ENST00000494028 IGKV1D-13A0A0B4J2D9 117 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 TEX13DA0A0J9YY54 714 aaPredicted RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 C13orf42A0A1B0GVH6 325 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 TUBAL3A6NHL2 446 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 ZSCAN5BA6NJL1 495 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 A6NLC8 198 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 A8MXE2 369 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 NPIPB11E5RHQ5 1161 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 ATP6V1G2-DDX39BF2Z307 99 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 H0YIZ8 118 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 HS3ST1O14792 307 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 WNT9BO14905 357 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 OR2F2O95006 317 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 HAND1O96004 215 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 FAM87AP0C7U9 286 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 IGKV1-13P0DP09 117 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 BMP5P22003 454 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 CD200P41217 278 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 RND3P61587 244 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 IL15RAQ13261 267 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 OR2F1Q13607 317 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 ABCA11PQ4W5N1 156 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 CLLU1Q5K131 121 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 C1QTNF12Q5T7M4 302 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 PCSK4Q6UW60 755 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 WDR82Q6UXN9 313 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF497Q6ZNH5 498 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 SPERTQ8NA61 448 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 OR5T2Q8NGG2 359 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 OR4A4PQ8NGN8 299 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 RTN4IP1Q8WWV3 396 aaPredicted RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 MRPL24Q96A35 216 aaKnown RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 OR10C1Q96KK4 312 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 C2orf50Q96LR7 162 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 MSL2Q9HCI7 577 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 TREM2Q9NZC2 230 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 MAB21L2Q9Y586 359 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 AUP1Q9Y679 476 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 DMXL2Q8TDJ6 3036 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
CLCN6-208ENST00000494028 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
CLCN6-208ENST00000494028 ZFHX4Q86UP3 3567 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 ZGRF1Q86YA3 2104 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 HEATR1Q9H583 2144 aaKnown RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 A0A0D9SG52 128 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 ANKRD34BA5PLL1 514 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LINC00862A6NCI5 91 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms