RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 DRAM1Q8N682 238 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 OR13C3Q8NGS6 347 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 HRASLS5Q96KN8 279 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 NOL4LQ96MY1 436 aaPredicted RBP13.75□□□□□ -0.21
COL9A1-210ENST00000493682 WWC2-AS2Q96NR7 200 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 TENM3Q9P273 2699 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 A0A1W2PPI3 338 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 J3QR06 171 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 SLC16A6O15403 523 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 CCR9P51686 369 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 C8orf86Q6ZUL3 223 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 C5orf56Q8N8D9 126 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 OR51T1Q8NGJ9 327 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 CHPT1Q8WUD6 406 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 LEAP2Q969E1 77 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 MCRIP2Q9BUT9 160 aaKnown RBP13.74□□□□□ -0.21
COL9A1-210ENST00000493682 AMMECR1Q9Y4X0 333 aaPredicted RBP13.74□□□□□ -0.21
COL9A1-210ENST00000493682 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
COL9A1-210ENST00000493682 DAPL1A0PJW8 107 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 OR4C45A6NMZ5 311 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 NUDT19A8MXV4 375 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 J3QRE1 110 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 HSPB6O14558 160 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 IGHV3-7P01780 117 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 HTR1AP08908 422 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 TMEM225BP0DP42 221 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 MYCNOSP40205 109 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 GLP1RP43220 463 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 ZP1P60852 638 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 BNIP1Q12981 228 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 HES1Q14469 280 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 ZNF565Q8N9K5 539 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 OR13A1Q8NGR1 328 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 P2RX4Q99571 388 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 ZCCHC4Q9H5U6 513 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 CALYQ9NYX4 217 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 KIF25Q9UIL4 384 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 MYRFQ9Y2G1 1151 aa13.73□□□□□ -0.21
COL9A1-210ENST00000493682 MEIKINA0A087WXM9 373 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 SERPINE3A8MV23 424 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 H0YJX3 145 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 FCGR1AP12314 374 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 TMEM11P17152 192 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 SLC6A1P30531 599 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 HNF4GQ14541 408 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 KISS1Q15726 138 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 KLHL30-AS1Q8NEE0 82 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 RNFT2Q96EX2 444 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 NCOR1P1Q9H4R4 102 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 LINC00574Q9H8X3 128 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 OAZ3Q9UMX2 235 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 PSG11Q9UQ72 335 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 DNAH9Q9NYC9 4486 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 RYR3Q15413 4870 aa13.72□□□□□ -0.21
COL9A1-210ENST00000493682 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 J3QLW9 94 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 FGF16O43320 207 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 IL1AP01583 271 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 HCKP08631 526 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
COL9A1-210ENST00000493682 ZNF19P17023 458 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 MTNR1BP49286 362 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 RAB7AP51149 207 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 DCTN2Q13561 401 aaKnown RBP13.71□□□□□ -0.21
COL9A1-210ENST00000493682 PAN3Q58A45 887 aaKnown RBP13.71□□□□□ -0.21
COL9A1-210ENST00000493682 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
COL9A1-210ENST00000493682 C4orf36Q96KX1 117 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.21
COL9A1-210ENST00000493682 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 IMPAD1Q9NX62 359 aa13.71□□□□□ -0.21
COL9A1-210ENST00000493682 NPIPB11E5RHQ5 1161 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 IGHG2P01859 326 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 C21orf33P30042 268 aaPredicted RBP13.7□□□□□ -0.22
COL9A1-210ENST00000493682 GNG10P50151 68 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 SLC35B1P78383 322 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 DGCR2P98153 550 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 ALKBH1Q13686 389 aaKnown RBP13.7□□□□□ -0.22
COL9A1-210ENST00000493682 LTC4SQ16873 150 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 ZNF691Q5VV52 312 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 ELP2Q6IA86 826 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 SLC35E3Q7Z769 313 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 OR8H3Q8N146 312 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 COMMD1Q8N668 190 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 ACBD7Q8N6N7 88 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 RFESDQ8TAC1 157 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 CNIH3Q8TBE1 160 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 HAVCR2Q8TDQ0 301 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
COL9A1-210ENST00000493682 DUX3Q96PT4 197 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 BARHL1Q9BZE3 327 aa13.7□□□□□ -0.22
COL9A1-210ENST00000493682 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms