RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ARSBP15848 533 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 CCL3L1P16619 93 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 EPHA1P21709 976 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 RANBP1P43487 201 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 HILS1P60008 231 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 MXD1Q05195 221 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 AESQ08117 197 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 KRBOX4Q5JUW0 171 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 USP43Q70EL4 1123 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 SUMF2Q8NBJ7 301 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 FAM216AQ8WUB2 273 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 SLC25A28Q96A46 364 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 COQ2Q96H96 371 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 Q96M66 194 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 DMRTB1Q96MA1 342 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 JMJD8Q96S16 334 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 DPCDQ9BVM2 203 aaPredicted RBP9.52□□□□□ -0.89
CTSA-209ENST00000493522 STEAP1Q9UHE8 339 aa9.52□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A10PA6NDY2 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A18PA6NE21 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A16PA6NEW6 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A20PA6NIJ5 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A8PA6NJQ4 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A7PA6NKC0 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A22PA8MWA6 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A12PA8MX19 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A5PA8MXJ8 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A23PA8MXZ1 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 M0R1W7 72 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 CSN2P05814 226 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A15PP0C7V4 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A13PP0C7W8 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A14PP0C7W9 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM90A24PP0C7X0 464 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 CD37P11049 281 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 MMP9P14780 707 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 SDC2P34741 201 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 GLP1RP43220 463 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 LSM3P62310 102 aaKnown RBP9.51□□□□□ -0.89
CTSA-209ENST00000493522 RPS27AP62979 156 aaKnown RBP9.51□□□□□ -0.89
CTSA-209ENST00000493522 PRB3Q04118 309 aaPredicted RBP9.51□□□□□ -0.89
CTSA-209ENST00000493522 MEF2CQ06413 473 aaPredicted RBP9.51□□□□□ -0.89
CTSA-209ENST00000493522 UNC119Q13432 240 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 KLF17Q5JT82 389 aaPredicted RBP9.51□□□□□ -0.89
CTSA-209ENST00000493522 NKAPLQ5M9Q1 402 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 GPR157Q5UAW9 335 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 TMEM200BQ69YZ2 307 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 RAB12Q6IQ22 244 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 TCF23Q7RTU1 214 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 OR2W3Q7Z3T1 314 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 TPRA1Q86W33 373 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 PDZD9Q8IXQ8 264 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 BPIFB2Q8N4F0 458 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 OR51D1Q8NGF3 324 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 OR13F1Q8NGS4 319 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 LHX4Q969G2 390 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 ZNF714Q96N38 554 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 IFT22Q9H7X7 185 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 NUP50Q9UKX7 468 aa9.51□□□□□ -0.89
CTSA-209ENST00000493522 TRGV10A0A0A0MS01 117 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 A0A0B4J203 849 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 hCG_1809904A0A1W2PP81 198 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 A0A1W2PPE2 198 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 A0A1W2PR64 198 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 A0A1W2PRV1 198 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 ODAMA1E959 279 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 TMEM89A2RUT3 159 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 NOTOA8MTQ0 251 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 TMEM14DPA8MWL7 114 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 AIPO00170 330 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 CLEC2LP0C7M8 214 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 ZNF728P0DKX0 622 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 SLC2A2P11168 524 aaPredicted RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 ERP29P30040 261 aaKnown RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 GLIPR1P48060 266 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 KCNJ3P48549 501 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 DLX1P56177 255 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 QRFPP83859 136 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 KLRD1Q13241 179 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 RUSC1-AS1Q66K80 236 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 GDPGP1Q6ZNW5 385 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 NR2C2APQ86WQ0 139 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 Q8N7P7 452 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 C22orf15Q8WYQ4 148 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 NICN1Q9BSH3 213 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 URM1Q9BTM9 101 aaKnown RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 FUNDC2Q9BWH2 189 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 LIN7BQ9HAP6 207 aa9.5□□□□□ -0.89
CTSA-209ENST00000493522 RCC2Q9P258 522 aaKnown RBP9.5□□□□□ -0.89
CTSA-209ENST00000493522 KIF25Q9UIL4 384 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms