RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 UBE2J1Q9Y385 318 aaPredicted RBP6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 PEX16Q9Y5Y5 336 aa6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 LINC00312Q9Y6C7 94 aa6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 ZFHX3Q15911 3703 aa6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.34
TM4SF1-204ENST00000493348 A0A1W2PP11 408 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 TMEM82A0PJX8 343 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 TMEM30CPA0ZSE6 113 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 ODAMA1E959 279 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 BTBD17A6NE02 478 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 NOTOA8MTQ0 251 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 SLC22A1O15245 554 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 PSPNO60542 156 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 CSN2P05814 226 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 ZNF728P0DKX0 622 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 FUT3P21217 361 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 OR3A1P47881 315 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 PAX2Q02962 417 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 MXD1Q05195 221 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 TMEM200BQ69YZ2 307 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 OR52W1Q6IF63 320 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 RAB12Q6IQ22 244 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 Q6P435 159 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 CRIP3Q6Q6R5 217 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 GPR141Q7Z602 305 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 CROCCP3Q8IVE0 287 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 PDZD9Q8IXQ8 264 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 TPRX1Q8N7U7 411 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 Q8NFD4 153 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 OR51D1Q8NGF3 324 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 OR56B1Q8NGI3 324 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 C22orf15Q8WYQ4 148 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 SIRPDQ9H106 197 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 PPIL3Q9H2H8 161 aaKnown RBP6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 IFT22Q9H7X7 185 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 PLEKHJ1Q9NW61 149 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 KCNIP1Q9NZI2 227 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 OPN4Q9UHM6 478 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 SCOCQ9UIL1 159 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 RAB22AQ9UL26 194 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 TRAPPC2LQ9UL33 140 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 JMJD1CQ15652 2540 aa6.7□□□□□ -1.34
TM4SF1-204ENST00000493348 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TRAV24A0A0B4J272 114 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 IGHV1-69DA0A0B4J2H0 117 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 UBE2QL1A1L167 161 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 ZNF729A6NN14 1252 aaPredicted RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 IFITM5A6NNB3 132 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 AIPO00170 330 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TOR1AO14656 332 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 PDCD6O75340 191 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 CA11O75493 328 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 CLPXO76031 633 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 SCGNO76038 276 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 AVPP01185 164 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 IGHV1-69P01742 117 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 RBP4P02753 201 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 GLAP06280 429 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 IGHV4-38-2P0DP08 117 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 VSIG8P0DPA2 414 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 CCL3L1P16619 93 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 JUNBP17275 347 aaPredicted RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 PRTN3P24158 256 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 BLVRBP30043 206 aaPredicted RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 SDC2P34741 201 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 GLIPR1P48060 266 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 UBE2E1P51965 193 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 CLDN12P56749 244 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 LSM3P62310 102 aaKnown RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 RPS27AP62979 156 aaKnown RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 DYNC1I2Q13409 638 aaKnown RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 ZNF273Q14593 569 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 C2orf76Q3KRA6 126 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 C6orf183Q5T699 404 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 SLC35E4Q6ICL7 350 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TRAT1Q6PIZ9 186 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 ZNF782Q6ZMW2 699 aaPredicted RBP6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TMEM104Q8NE00 496 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 Q96M66 194 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TBX15Q96SF7 602 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 SLC6A7Q99884 636 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 LIN7BQ9HAP6 207 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 TAS2R3Q9NYW6 316 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 DAPK2Q9UIK4 370 aa6.69□□□□□ -1.34
TM4SF1-204ENST00000493348 A0A0A6YYJ9 748 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 CENPVL3A0A0U1RRI6 287 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 A0A1W2PRD5 423 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 A0A1W2PRF3 423 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 A0A1W2PRM7 423 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 MEX3AA1L020 520 aaKnown RBP6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 MEIOCA2RUB1 952 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 SMIM30A4D0T7 59 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 TRIM77I1YAP6 450 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 NPFFO15130 113 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 SPINT2O43291 252 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 FBP1P09467 338 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 MMP9P14780 707 aa6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 HOXB4P17483 251 aaPredicted RBP6.68□□□□□ -1.34
TM4SF1-204ENST00000493348 GZMHP20718 246 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms