RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MED30Q96HR3 178 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 DPCDQ9BVM2 203 aaPredicted RBP11.16□□□□□ -0.62
MSH6-208ENST00000493177 CHST6Q9GZX3 395 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 DNTTIP1Q9H147 329 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 PPA2Q9H2U2 334 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 ING3Q9NXR8 418 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.16□□□□□ -0.62
MSH6-208ENST00000493177 TRAV20A0A0B4J274 112 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 A0A1B0GW55 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 TMEM82A0PJX8 343 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 SIGLEC5O15389 551 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 XRCC3O43542 346 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 NDUFB3O43676 98 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 FSTL3O95633 263 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L2P0CJ85 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L3P0CJ86 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L4P0CJ87 422 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L5P0CJ88 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L6P0CJ89 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L7P0CJ90 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 SELLP14151 372 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 GNB3P16520 340 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 AMY2BP19961 511 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 CHATP28329 748 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 MNDAP41218 407 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 TMEM50BP56557 158 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 TAS2R20P59543 309 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 IL18Q14116 193 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 RBM39Q14498 530 aaKnown RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 GRK1Q15835 563 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 CDNFQ49AH0 187 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 ATPAF1Q5TC12 328 aaPredicted RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 SIGIRRQ6IA17 410 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4L9Q6RFH8 374 aaPredicted RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 FAM131AQ6UXB0 335 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 NLRC3Q7RTR2 1065 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 RTN4RL2Q86UN3 420 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 ZNRF1Q8ND25 227 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 TMEM158Q8WZ71 300 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 C1orf159Q96HA4 380 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 SNX22Q96L94 193 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 WDFY2Q96P53 400 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 MDFIQ99750 246 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 PECRQ9BY49 303 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 IFT22Q9H7X7 185 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.62
MSH6-208ENST00000493177 DUX4Q9UBX2 424 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 MAB21L2Q9Y586 359 aa11.15□□□□□ -0.62
MSH6-208ENST00000493177 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 FABP12A6NFH5 140 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 PHF1O43189 567 aaPredicted RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 PSPNO60542 156 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 IGHV2-5P01817 119 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 TK1P04183 234 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 NDUFB7P17568 137 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 LMO1P25800 156 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 LMO4P61968 165 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 EDDM3AQ14507 147 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 OR4S1Q8NGB4 309 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 ST8SIA4Q92187 359 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 DYRK2Q92630 601 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 NEIL1Q96FI4 390 aaPredicted RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 SULT4A1Q9BR01 284 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 NUDT16L1Q9BRJ7 211 aaKnown RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 PATZ1Q9HBE1 687 aaKnown RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
MSH6-208ENST00000493177 SLC25A10Q9UBX3 287 aaPredicted RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 SONP18583 2426 aaKnown RBP11.14□□□□□ -0.63
MSH6-208ENST00000493177 NF1P21359 2839 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 A0A0G2JMP0 313 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 A0A0X1KG70 313 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 TMEM235A6NFC5 223 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 K7N7A8 449 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 DVL1O14640 695 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
MSH6-208ENST00000493177 GLAP06280 429 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 CD3GP09693 182 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 OR3A1P47881 315 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 GNG2P59768 71 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 ZNF260Q3ZCT1 412 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 DCAF12L2Q5VW00 463 aa11.13□□□□□ -0.63
MSH6-208ENST00000493177 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms