RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 OR2H2O95918 312 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TK1P04183 234 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 HERV-K104P61576 105 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 KLRB1Q12918 225 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 PAN3Q58A45 887 aaKnown RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 IGSF11Q5DX21 431 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 GSG1LQ6UXU4 331 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 SLC38A6Q8IZM9 456 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 RND1Q92730 232 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 SH3BGRL2Q9UJC5 107 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 IGLV3-9A0A075B6K5 115 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TEX13DA0A0J9YY54 714 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-216ENST00000492977 A6NLC8 198 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 L7N2F9 121 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 CCSO14618 274 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TSC22D2O75157 780 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 DIRAS3O95661 229 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 PPYP01298 95 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 SCTP09683 121 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 AADACP22760 399 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 CD40P25942 277 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 CCKARP32238 428 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 CD200P41217 278 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 SORDQ00796 357 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 ANKRD55Q3KP44 614 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 ABCA11PQ4W5N1 156 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TMEM65Q6PI78 240 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 WDR82Q6UXN9 313 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 MOB1BQ7L9L4 216 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 GAPTQ8N292 157 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TMEM171Q8WVE6 324 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 ELMOD3Q96FG2 381 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 NMES1Q9C002 83 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 HEXA-AS1Q9H8Q6 139 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 KCNIP3Q9Y2W7 256 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 FAM25EA8MYX2 175 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
PTPN7-216ENST00000492977 HAND1O96004 215 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SLC25A4P12235 298 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 CXCL2P19875 107 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 LMO1P25800 156 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SSTR2P30874 369 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SERPINF1P36955 418 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 RBMXP38159 391 aaKnown RBP11.87□□□□□ -0.51
PTPN7-216ENST00000492977 CASP6P55212 293 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 PIGPP57054 158 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 FXYD4P59646 89 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SELENOVP59797 346 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 TMEM108Q6UXF1 575 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 C22orf34Q6ZV56 151 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 GALNT14Q96FL9 552 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SEC22AQ96IW7 307 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 DMRTA2Q96SC8 542 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-216ENST00000492977 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 RSRP1Q9BUV0 290 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 C1orf123Q9NWV4 160 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 RASL12Q9NYN1 266 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 PCDHB10Q9UN67 800 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 CEP295Q9C0D2 2601 aa11.87□□□□□ -0.51
PTPN7-216ENST00000492977 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 M0R233 179 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 SIRPB1O00241 398 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF205O95201 554 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 RPA2P15927 270 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 PTAFRP25105 342 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 CFHR2P36980 270 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 C11orf87Q6NUJ2 197 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 TEX261Q6UWH6 196 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 ACP7Q6ZNF0 438 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 CCDC71LQ8N9Z2 235 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 NUP37Q8NFH4 326 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 OR8H1Q8NGG4 311 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 U3KQ87 197 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms