RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FIP1L1Q6UN15 594 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 C6orf201Q7Z4U5 140 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 RTN4RL2Q86UN3 420 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 OR10Z1Q8NGY1 313 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 ERGIC1Q969X5 290 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 OR2A7Q96R45 310 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 GCM1Q9NP62 436 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 RPS10-NUDT3A0A1W2PQS6 291 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 A6NNC1 897 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 GLRA1P23415 457 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 DUSP1P28562 367 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ACTBP60709 375 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ACTG1P63261 375 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 PDCD1Q15116 288 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ST8SIA4Q92187 359 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 DECR2Q9NUI1 292 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ZNF581Q9P0T4 197 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 UBE2QL1A1L167 161 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 HS3ST1O14792 307 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 GOSR1O95249 250 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 OPCMLQ14982 345 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ZNF146Q15072 292 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 TRAPPC6BQ86SZ2 158 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SAP30LQ9HAJ7 183 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 FBXO9Q9UK97 447 aaPredicted RBP11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 PPP1R3CQ9UQK1 317 aa11.87□□□□□ -0.51
PDZRN3-210ENST00000492909 WNT9BO14905 357 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 CA11O75493 328 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 PMELP40967 661 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 GRK1Q15835 563 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 OR11L1Q8NGX0 322 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 Q8TCH9 128 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 C17orf50Q8WW18 174 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 RASL12Q9NYN1 266 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 MAB21L2Q9Y586 359 aa11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-210ENST00000492909 PTPN13Q12923 2485 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 A0A1W2PPR1 153 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 SHOXO15266 292 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 SSX5O60225 188 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 CXCL2P19875 107 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 PPOXP50336 477 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 CCDC28AQ8IWP9 274 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 TMEM229BQ8NBD8 167 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 OR4D10Q8NGI6 311 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 CBLN4Q9NTU7 201 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 RNF7Q9UBF6 113 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 GLS2Q9UI32 602 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 CRYBG3Q68DQ2 2970 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
PDZRN3-210ENST00000492909 SH2D1BO14796 132 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 DEGS1O15121 323 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 CFDP00746 253 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 KNG1P01042 644 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 LHBP01229 141 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 IRF2P14316 349 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 ZNF44P15621 663 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 CBX5P45973 191 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 TAS2R19P59542 299 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 TOR2AQ5JU69 321 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 STEAP1BQ6NZ63 245 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 FAM90A1Q86YD7 464 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 OR51S1Q8NGJ8 323 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 IFT46Q9NQC8 304 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 OR14J1Q9UGF5 321 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 PLEKHA6Q9Y2H5 1048 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 HECTD1Q9ULT8 2610 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 LRRC30A6NM36 301 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 MCRIP1C9JLW8 97 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 L7N2F9 121 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 CRYZL1O95825 349 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 OR2H2O95918 312 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms