RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 C22orf34Q6ZV56 151 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 OR11H4Q8NGC9 324 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 GRPEL2Q8TAA5 225 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 LRRC29Q8WV35 223 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 TOMM40LQ969M1 308 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 MOB3AQ96BX8 217 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 TMEM246Q9BRR3 403 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 MRPL37Q9BZE1 423 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 SLA2Q9H6Q3 261 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 NGBQ9NPG2 151 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 DECR2Q9NUI1 292 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 C1orf123Q9NWV4 160 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 OR14J1Q9UGF5 321 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 SLC23A1Q9UHI7 598 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 ATP23Q9Y6H3 246 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 RAI1Q7Z5J4 1906 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 SPTBN4Q9H254 2564 aa7.73□□□□□ -1.17
SMARCC1-208ENST00000492896 PCNX1Q96RV3 2341 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 FAM90A27PA6NNH2 459 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CCL21O00585 134 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CCSO14618 274 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 WNT9BO14905 357 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 RGS13O14921 159 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 SPRY3O43610 288 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PPYP01298 95 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 TK1P04183 234 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 HLA-GP17693 338 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 AADACP22760 399 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 TNFSF4P23510 183 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CHRNB4P30926 498 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CEBPDP49716 269 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 ZNF81P51508 661 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 SNRPD2P62316 118 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 BSPH1Q075Z2 132 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 ATXN7L3Q14CW9 347 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 ABCA11PQ4W5N1 156 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 IGSF11Q5DX21 431 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 LAMTOR1Q6IAA8 161 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CLEC18BQ6UXF7 455 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 KCTD9Q7L273 389 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 SGPP2Q8IWX5 399 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 ASCC1Q8N9N2 400 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CCDC71LQ8N9Z2 235 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 OR5T2Q8NGG2 359 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 OR4A4PQ8NGN8 299 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PRR7Q8TB68 274 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PLPPR1Q8TBJ4 325 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PIK3IP1Q96FE7 263 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 OR2V2Q96R30 315 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PDCD10Q9BUL8 212 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 TMPRSS13Q9BYE2 586 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 LIME1Q9H400 295 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 TMEM165Q9HC07 324 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 RASL12Q9NYN1 266 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 COQ3Q9NZJ6 369 aa7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 PRRC2CQ9Y520 2896 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-208ENST00000492896 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.17
SMARCC1-208ENST00000492896 DMXL2Q8TDJ6 3036 aa7.71□□□□□ -1.17
SMARCC1-208ENST00000492896 RP1L1Q8IWN7 2480 aaPredicted RBP7.71□□□□□ -1.17
SMARCC1-208ENST00000492896 DYSFO75923 2080 aa7.71□□□□□ -1.17
SMARCC1-208ENST00000492896 TEX13DA0A0J9YY54 714 aaPredicted RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 CRYM-AS1A6NIL9 109 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 DBX1A6NMT0 343 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 SRRM5B3KS81 715 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 BET1O15155 118 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 SNAPC5O75971 98 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 ZNF205O95201 554 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 IFNA2P01563 188 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 CD8AP01732 235 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 SCTP09683 121 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 RPS2P15880 293 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 EGR1P18146 543 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 C4BPBP20851 252 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 NFYAP23511 347 aaPredicted RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 LMO1P25800 156 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 RBMXP38159 391 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 KCNJ3P48549 501 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 PIGPP57054 158 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 SRSF4Q08170 494 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 HERPUD1Q15011 391 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 Q5BKY6 102 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 GSG1LQ6UXU4 331 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 ZNF497Q6ZNH5 498 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 MOGAT3Q86VF5 341 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 FAM90A1Q86YD7 464 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 GAPTQ8N292 157 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 ITLN1Q8WWA0 313 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 RNASE6Q93091 150 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 WDR89Q96FK6 387 aaPredicted RBP7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 LRRC46Q96FV0 321 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 RSRP1Q9BUV0 290 aa7.71□□□□□ -1.18
SMARCC1-208ENST00000492896 GON7Q9BXV9 100 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms