RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RPL22L1Q6P5R6 122 aaKnown RBP9.97□□□□□ -0.81
COL6A1-205ENST00000492851 TMPRSS11AQ6ZMR5 421 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 LYG1Q8N1E2 194 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 ZNF555Q8NEP9 628 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 Q8NFD4 153 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 CNIH3Q8TBE1 160 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 SGCDQ92629 289 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 S100A13Q99584 98 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 JAM3Q9BX67 310 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 LINC00574Q9H8X3 128 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 TSSC4Q9Y5U2 329 aaPredicted RBP9.97□□□□□ -0.81
COL6A1-205ENST00000492851 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.81
COL6A1-205ENST00000492851 MEIKINA0A087WXM9 373 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 TCRBV4S1A1TA0A5B7 111 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 LY6LH3BQJ8 138 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF780AO75290 641 aaPredicted RBP9.96□□□□□ -0.82
COL6A1-205ENST00000492851 DUS4LO95620 317 aaKnown RBP9.96□□□□□ -0.82
COL6A1-205ENST00000492851 CLIC3O95833 236 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 CD33P20138 364 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 GZMHP20718 246 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 NFYBP25208 207 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 DCKP27707 260 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 RAB7AP51149 207 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ATXN7L3Q14CW9 347 aaPredicted RBP9.96□□□□□ -0.82
COL6A1-205ENST00000492851 C17orf58Q2M2W7 97 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ABCA11PQ4W5N1 156 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF529Q6P280 563 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 Q6ZS46 218 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 SATL1Q86VE3 508 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 OR52I1Q8NGK6 324 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 TNFAIP8L1Q8WVP5 186 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 RPEQ96AT9 228 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 COQ2Q96H96 371 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 NR1H4Q96RI1 486 aaPredicted RBP9.96□□□□□ -0.82
COL6A1-205ENST00000492851 PDCD1LG2Q9BQ51 273 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF649Q9BS31 505 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF286AQ9HBT8 521 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 AMBNQ9NP70 447 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 FGF20Q9NP95 211 aaPredicted RBP9.96□□□□□ -0.82
COL6A1-205ENST00000492851 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.82
COL6A1-205ENST00000492851 ADARB2-AS1A8MUL3 147 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 J3QR06 171 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 CSTBP04080 98 aaKnown RBP9.95□□□□□ -0.82
COL6A1-205ENST00000492851 LPLP06858 475 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 CGB3P0DN86 165 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 CGB7P0DN87 165 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 JUNBP17275 347 aaPredicted RBP9.95□□□□□ -0.82
COL6A1-205ENST00000492851 LOXL3P58215 753 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 PPP3R1P63098 170 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 MADCAM1Q13477 382 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 MED21Q13503 144 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 RBM39Q14498 530 aaKnown RBP9.95□□□□□ -0.82
COL6A1-205ENST00000492851 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 ASCL4Q6XD76 172 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 LINC00596Q86U02 117 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 PQLC1Q8N2U9 271 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 KIRREL1Q96J84 757 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 METTL9Q9H1A3 318 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 IFT22Q9H7X7 185 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 S100A14Q9HCY8 104 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM138Q9NPI0 162 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 ING3Q9NXR8 418 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 CALYQ9NYX4 217 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 IDI2-AS1Q9NZ38 188 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 AASSQ9UDR5 926 aa9.95□□□□□ -0.82
COL6A1-205ENST00000492851 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 NPIPB11E5RHQ5 1161 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 E9PI62 339 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 GABRPO00591 440 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 PIN1P1O15428 100 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 HTR3BO95264 441 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 IL1AP01583 271 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 CD24P25063 80 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 ZNF93P35789 620 aaPredicted RBP9.94□□□□□ -0.82
COL6A1-205ENST00000492851 GLP1RP43220 463 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 OR3A4PP47883 348 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 SLC35A2P78381 396 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 GPR176Q14439 515 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 NHLRC3Q5JS37 347 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 BAIAP2L2Q6UXY1 529 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 RNF144BQ7Z419 303 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 OR8H3Q8N146 312 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 TMEM106AQ96A25 262 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 SLC29A1Q99808 456 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 FAM192AQ9GZU8 254 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 PPIL3Q9H2H8 161 aaKnown RBP9.94□□□□□ -0.82
COL6A1-205ENST00000492851 C8orf4Q9NR00 106 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 CHCHD3Q9NX63 227 aaKnown RBP9.94□□□□□ -0.82
COL6A1-205ENST00000492851 BABAM2Q9NXR7 383 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 IL36GQ9NZH8 169 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 CKLFQ9UBR5 152 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 KIF25Q9UIL4 384 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 ST3GAL6Q9Y274 331 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 MOB4Q9Y3A3 225 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 HSPE1-MOB4S4R3N1 261 aa9.94□□□□□ -0.82
COL6A1-205ENST00000492851 FAM172BPA6NC97 362 aa9.93□□□□□ -0.82
COL6A1-205ENST00000492851 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms