RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ZNF728P0DKX0 622 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
VPS8-225ENST00000492449 NPBWR2P48146 333 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 SQSTM1Q13501 440 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 MLF2Q15773 248 aaPredicted RBP8.4□□□□□ -1.06
VPS8-225ENST00000492449 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 VN1R4Q7Z5H5 301 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 CMTM8Q8IZV2 173 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 TMEM234Q8WY98 164 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 BCL2L2Q92843 193 aaPredicted RBP8.4□□□□□ -1.06
VPS8-225ENST00000492449 SLC46A1Q96NT5 459 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 TM2D1Q9BX74 207 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 NKX2-4Q9H2Z4 354 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 BANF2Q9H503 90 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 LYRM4Q9HD34 91 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 RPRMQ9NS64 109 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 A0A1W2PRS3 328 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 RAMP3O60896 148 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 PIAS2O75928 621 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 REG1AP05451 166 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 OR3A4PP47883 348 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 RPL27P61353 136 aaKnown RBP8.4□□□□□ -1.07
VPS8-225ENST00000492449 RTP5Q14D33 572 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 SNAI3Q3KNW1 292 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 PRR27Q6MZM9 219 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 FBXO42Q6P3S6 717 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 TMEM217Q8N7C4 229 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 TCTEX1D1Q8N7M0 179 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 CYYR1Q96J86 154 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 SPIN2AQ99865 258 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 SPIN2BQ9BPZ2 258 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 DOCK9Q9BZ29 2069 aa8.4□□□□□ -1.07
VPS8-225ENST00000492449 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ZNF320A2RRD8 509 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ZNF878C9JN71 531 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 SLC16A7O60669 478 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 TNFSF15O95150 251 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 HLA-HP01893 362 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 GYPAP02724 150 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 WNT2P09544 360 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 PPP1CBP62140 327 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 PLPPR5Q32ZL2 321 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ABCA11PQ4W5N1 156 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 Q6ZVH6 145 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 PLPPR1Q8TBJ4 325 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 STARD4Q96DR4 205 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 PARLQ9H300 379 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 LIME1Q9H400 295 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 UBE2ZQ9H832 354 aaPredicted RBP8.39□□□□□ -1.07
VPS8-225ENST00000492449 SMPXQ9UHP9 88 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ANXA10Q9UJ72 324 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 KIAA2026Q5HYC2 2103 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 TMEM131Q92545 1883 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 TNFRSF10CO14798 259 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 B3GALT2O43825 422 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ZNF737O75373 536 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 SERF1AO75920 110 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 GPR75O95800 540 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 PEBP1P30086 187 aaKnown RBP8.39□□□□□ -1.07
VPS8-225ENST00000492449 SLC11A1P49279 550 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 RPS15AP62244 130 aaKnown RBP8.39□□□□□ -1.07
VPS8-225ENST00000492449 ARG2P78540 354 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 SERF2P84101 59 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 NHLH1Q02575 133 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 HYAL1Q12794 435 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 RNF144BQ7Z419 303 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 MCEMP1Q8IX19 187 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 OR4S2Q8NH73 311 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ZNF721Q8TF20 911 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 ABHD3Q8WU67 409 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 TM4SF19Q96DZ7 209 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 TUBG2Q9NRH3 451 aa8.39□□□□□ -1.07
VPS8-225ENST00000492449 RYDENQ9NUL5 291 aaKnown RBP8.39□□□□□ -1.07
VPS8-225ENST00000492449 PCNX3Q9H6A9 2034 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 SAA2-SAA4A0A096LPE2 208 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 ZNF814B7Z6K7 855 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 J3QR06 171 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 CORTO00230 105 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
VPS8-225ENST00000492449 CTSEP14091 401 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 CTLA4P16410 223 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 CMPK1P30085 196 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 WASP42768 502 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 OTPQ5XKR4 325 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 MUC15Q8N387 334 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 OR52R1Q8NGF1 315 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 OR51T1Q8NGJ9 327 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 RNF133Q8WVZ7 376 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 MRPL13Q9BYD1 178 aaKnown RBP8.38□□□□□ -1.07
VPS8-225ENST00000492449 CHODLQ9H9P2 273 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 SOHLH2Q9NX45 425 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 DOCK8Q8NF50 2099 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 MYOFQ9NZM1 2061 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
VPS8-225ENST00000492449 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms