RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MRPL48Q96GC5 212 aaKnown RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 MRPS26Q9BYN8 205 aaKnown RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 PRSS22Q9GZN4 317 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 WNT10AQ9GZT5 417 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 ELL3Q9HB65 397 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 KRT84Q9NSB2 600 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 SERTAD4Q9NUC0 356 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 TCF19Q9Y242 345 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 SIGLEC9Q9Y336 463 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 RBMX2Q9Y388 322 aaKnown RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 R4GMQ9 66 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 A6NDX4 124 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 G3V4G9 280 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 H3BNX3 289 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 FBXO24O75426 580 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 SRSF10O75494 262 aaKnown RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 NXPH2O95156 264 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 TTRP02766 147 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 TFF1P04155 84 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CD3GP09693 182 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 LINC00614P0C842 121 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 T-ENOLP0DO92 83 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CCL1P22362 96 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 AZGP1P25311 298 aaKnown RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CRISP1P54107 249 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 DLX6P56179 175 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CDK10Q15131 360 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CNN3Q15417 329 aaKnown RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 USF2Q15853 346 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 MINOS1Q5TGZ0 78 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF626Q68DY1 528 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF767PQ75MW2 155 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 WFDC9Q8NEX5 89 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 OR10J5Q8NHC4 309 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CANT1Q8WVQ1 401 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 C10orf35Q96D05 121 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CNN2Q99439 309 aaKnown RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 ABCB10Q9NRK6 738 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 NECAP2Q9NVZ3 263 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CLN6Q9NWW5 311 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 TVP23BQ9NYZ1 205 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 WARS2Q9UGM6 360 aaKnown RBP7.38□□□□□ -1.23
HDAC3-212ENST00000492407 CLEC2DQ9UHP7 191 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 FOXJ3Q9UPW0 622 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 MINOS1-NBL1R4GNA1 71 aa7.38□□□□□ -1.23
HDAC3-212ENST00000492407 A0A1B0GTI1 187 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 CCDC182A6NF36 153 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 PIN1P1O15428 100 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SYNGR1O43759 233 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 CHST1O43916 411 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF737O75373 536 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 CIB2O75838 187 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF728P0DKX0 622 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 VSIG10L2P0DP72 767 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 BMXP51813 675 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 HCCSP53701 268 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 OR12D2P58182 307 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 LOXL3P58215 753 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 EFNB1P98172 346 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SLC34A1Q06495 639 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 FAM189A2Q15884 450 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 PNLIPRP3Q17RR3 467 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 MOGAT2Q3SYC2 334 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 BCL2L15Q5TBC7 163 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 NXNL2Q5VZ03 156 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 FAHD1Q6P587 224 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF322Q6U7Q0 402 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-212ENST00000492407 Q6ZPA2 131 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 PLEKHG7Q6ZR37 379 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 MEPCEQ7L2J0 689 aaKnown RBP7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SSX9Q7RTT3 188 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 C16orf82Q7Z2V1 217 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SMIM15Q7Z3B0 74 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 Q8IYB0 196 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 OR5H6Q8NGV6 325 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 OR14K1Q8NGZ2 314 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 MITD1Q8WV92 249 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SNX22Q96L94 193 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 GAL3ST2Q9H3Q3 398 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-212ENST00000492407 H2AFY2Q9P0M6 372 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-212ENST00000492407 OR52A1Q9UKL2 312 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 IKZF2Q9UKS7 526 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SLC7A11Q9UPY5 501 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 SLC22A13Q9Y226 551 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
HDAC3-212ENST00000492407 A0A075B6Q4 140 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 hADV38S2A0JD32 116 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 FAM90A22PA8MWA6 464 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 ZNF670-ZNF695F2Z2N8 137 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 M0QZK8 103 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 SLC16A6O15403 523 aa7.36□□□□□ -1.23
HDAC3-212ENST00000492407 FKBP6O75344 327 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms