RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 IFNA2P01563 188 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 CELA3BP08861 270 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 EIF5AP63241 154 aaKnown RBP19.47■□□□□ 0.71
USF3-203ENST00000491165 SRSF3P84103 164 aaKnown RBP19.47■□□□□ 0.71
USF3-203ENST00000491165 TFF3Q07654 80 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 OR4A4PQ8NGN8 299 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 C10orf35Q96D05 121 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 C1orf123Q9NWV4 160 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 NDRG3Q9UGV2 375 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 TIMM10BQ9Y5J6 103 aa19.47■□□□□ 0.71
USF3-203ENST00000491165 SGCEO43556 437 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 MTRF1O75570 445 aaKnown RBP19.46■□□□□ 0.71
USF3-203ENST00000491165 H2AFB1P0C5Y9 115 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 RBMXP38159 391 aaKnown RBP19.46■□□□□ 0.71
USF3-203ENST00000491165 ASCL1P50553 236 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 PJVKQ0ZLH3 352 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 MST1LQ2TV78 715 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 HAGHLQ6PII5 290 aaPredicted RBP19.46■□□□□ 0.71
USF3-203ENST00000491165 Q6ZSR3 168 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 CCDC54Q8NEL0 328 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 PIGTQ969N2 578 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 TREM1Q9NP99 234 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 ELOVL5Q9NYP7 299 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 TAAR5O14804 337 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 APOC1P02654 83 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 SFTPBP07988 381 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 CCL2P13500 99 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 OTX1P32242 354 aaPredicted RBP19.46■□□□□ 0.71
USF3-203ENST00000491165 HGFACQ04756 655 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 SAT2Q96F10 170 aaPredicted RBP19.46■□□□□ 0.71
USF3-203ENST00000491165 PRELID3BQ9Y3B1 194 aa19.46■□□□□ 0.71
USF3-203ENST00000491165 M0R135 149 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 NDUFA2O43678 99 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 EIF5AL1Q6IS14 154 aaKnown RBP19.45■□□□□ 0.7
USF3-203ENST00000491165 TMEM88Q6PEY1 159 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 TMEM200AQ86VY9 491 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 FAM219AQ8IW50 185 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 SPAG16Q8N0X2 631 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 ZNF799Q96GE5 643 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 SLC25A15Q9Y619 301 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 H7C2Y5 167 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 UBE2NP61088 152 aaKnown RBP19.45■□□□□ 0.7
USF3-203ENST00000491165 PCBD1P61457 104 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 SRSF1Q07955 248 aaKnown RBP eCLIP19.45■□□□□ 0.7
USF3-203ENST00000491165 FBXL19-AS1Q494R0 122 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 C6orf201Q7Z4U5 140 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 C17orf78Q8N4C9 275 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 SEMA6DQ8NFY4 1073 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 OR10Z1Q8NGY1 313 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 UQCC1Q9NVA1 299 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 PLEKHJ1Q9NW61 149 aa19.45■□□□□ 0.7
USF3-203ENST00000491165 OR6C6A6NF89 314 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 C16orf97H3BN30 126 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 SERPINA5P05154 406 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 GABRR1P24046 479 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 RAB35Q15286 201 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 SPTSSAQ969W0 71 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 SMIM8Q96KF7 97 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 ZNF2Q9BSG1 426 aaPredicted RBP19.44■□□□□ 0.7
USF3-203ENST00000491165 ADAT1Q9BUB4 502 aaKnown RBP19.44■□□□□ 0.7
USF3-203ENST00000491165 SEC11CQ9BY50 192 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 TLNRD1Q9H1K6 362 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 CADP27708 2225 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 DOPEY1Q5JWR5 2465 aa19.44■□□□□ 0.7
USF3-203ENST00000491165 IGKV1D-8A0A087WSZ0 117 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 SNAPINO95295 136 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 CRYGSP22914 178 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 RBM39Q14498 530 aaKnown RBP19.43■□□□□ 0.7
USF3-203ENST00000491165 TIMM23BQ5SRD1 257 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 ALKBH2Q6NS38 261 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 TMEM231Q9H6L2 316 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 TAF9BQ9HBM6 251 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 ZNF14P17017 642 aaPredicted RBP19.43■□□□□ 0.7
USF3-203ENST00000491165 HOXC12P31275 282 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 IAH1Q2TAA2 248 aaPredicted RBP19.43■□□□□ 0.7
USF3-203ENST00000491165 RPL7L1Q6DKI1 246 aaKnown RBP19.43■□□□□ 0.7
USF3-203ENST00000491165 FOXRED2Q8IWF2 684 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 SGPP2Q8IWX5 399 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 IQCF2Q8IXL9 164 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 OR1F12Q8NHA8 337 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 Q96M66 194 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 HRH4Q9H3N8 390 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 DCHS2Q6V1P9 2916 aa19.43■□□□□ 0.7
USF3-203ENST00000491165 DHRS7CA6NNS2 312 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 IGKV3-15P01624 115 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 CTSDP07339 412 aaPredicted RBP19.42■□□□□ 0.7
USF3-203ENST00000491165 HKR1P10072 659 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 HTR5AP47898 357 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 IDH3GP51553 393 aaPredicted RBP19.42■□□□□ 0.7
USF3-203ENST00000491165 HFEQ30201 348 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 DHRS7BQ6IAN0 325 aaPredicted RBP19.42■□□□□ 0.7
USF3-203ENST00000491165 HEATR1Q9H583 2144 aaKnown RBP19.42■□□□□ 0.7
USF3-203ENST00000491165 KCNJ16Q9NPI9 418 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 THBDP07204 575 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 TMEM225BP0DP42 221 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 ARR3P36575 388 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 CBLN2Q8IUK8 224 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 NANOS1Q8WY41 292 aaKnown RBP19.42■□□□□ 0.7
USF3-203ENST00000491165 RHOFQ9HBH0 211 aa19.42■□□□□ 0.7
USF3-203ENST00000491165 ANKHD1Q8IWZ3 2542 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms