RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ASPHD2Q6ICH7 369 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR52W1Q6IF63 320 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FBXO46Q6PJ61 603 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 WDR74Q6RFH5 385 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DPPA3Q6W0C5 159 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TMPPEQ6ZT21 453 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 COX15Q7KZN9 410 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RABEPKQ7Z6M1 372 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LGI3Q8N145 548 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GVQW1Q8N7I0 195 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 WDSUB1Q8N9V3 476 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 APCDD1LQ8NCL9 501 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CSNK2A3Q8NEV1 391 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CADM4Q8NFZ8 388 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR1J1Q8NGS3 322 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR13D1Q8NGV5 346 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZPLD1Q8TCW7 415 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC37A2Q8TED4 501 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SSC4DQ8WTU2 575 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PP6455Q8WZ26 134 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 C11orf40Q8WZ69 217 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DCUN1D4Q92564 292 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HAS2Q92819 552 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TCEAL3Q969E4 200 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MRGPRFQ96AM1 343 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SGK3Q96BR1 496 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RRNAD1Q96FB5 475 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GALNT14Q96FL9 552 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CPNE2Q96FN4 548 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ABHD14BQ96IU4 210 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR10C1Q96KK4 312 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF75AQ96N20 296 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TGM7Q96PF1 710 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DUX3Q96PT4 197 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GPER1Q99527 375 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GAL3ST1Q99999 423 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NRIP2Q9BQI9 281 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PIGQQ9BRB3 760 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GINS3Q9BRX5 216 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CRB3Q9BUF7 120 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PAPOLGQ9BWT3 736 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SCRT1Q9BWW7 348 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TM2D1Q9BX74 207 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PECRQ9BY49 303 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TTTY10Q9BZA0 68 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF5A2Q9GZV4 153 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 WWTR1Q9GZV5 400 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A31Q9H0C2 315 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TOLLIPQ9H0E2 274 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 METTL9Q9H1A3 318 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC35B3Q9H1N7 401 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RIMS4Q9H426 269 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ESRP2Q9H6T0 727 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PTGES2Q9H7Z7 377 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MOB1AQ9H8S9 216 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 UBTD1Q9HAC8 227 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SEBOXQ9HB31 216 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF160Q9HCG1 818 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SDF2L1Q9HCN8 221 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ACKR4Q9NPB9 350 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CHST11Q9NPF2 352 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS10P5Q9NQ39 176 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR2S2Q9NQN1 319 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NIT2Q9NQR4 276 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SIRT7Q9NRC8 400 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GSN-AS1Q9NRJ2 163 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM206AQ9NX38 181 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TAS2R4Q9NYW5 299 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LUZP4Q9P127 313 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CACFD1Q9UGQ2 172 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF391Q9UJN7 358 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PADI1Q9ULC6 663 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MMP17Q9ULZ9 603 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA1Q9UND3 350 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPS28Q9Y2Q9 187 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPS18CQ9Y3D5 142 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HDGFL3Q9Y3E1 203 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PTRH2Q9Y3E5 179 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RHBDD3Q9Y3P4 386 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ARHGAP21Q5T5U3 1957 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PRRC2BQ5JSZ5 2229 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CPAMD8Q8IZJ3 1885 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ABCA7Q8IZY2 2146 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MUC22E2RYF6 1773 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ATG2AQ2TAZ0 1938 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CACNA1DQ01668 2161 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LOC100509620A0A075B734 347 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A087WV48 116 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A087WZY1 265 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TRAV1-1A0A0B4J248 108 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1W2PNV4 684 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 DUXBA0A1W2PPF3 345 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CLEC18AA5D8T8 446 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A20PA6NIJ5 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CRYM-AS1A6NIL9 109 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LIPT2A6NK58 231 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A7PA6NKC0 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF729A6NN14 1252 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GJE1A6NN92 205 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF850A8MQ14 1090 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms