RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 UNQ9370/PRO34162Q6UXP9 181 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 OSR2Q8N2R0 312 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 OR4D6Q8NGJ1 314 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 OR4F5Q8NH21 305 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 LINC01006Q8NI28 216 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 MYDGFQ969H8 173 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 CPNE2Q96FN4 548 aaPredicted RBP14.66□□□□□ -0.06
COL9A3-214ENST00000490398 MND1Q9BWT6 205 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 METTL9Q9H1A3 318 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 IL36GQ9NZH8 169 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 KIF25Q9UIL4 384 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 TRGV10A0A0A0MS01 117 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 CLPSL1A2RUU4 121 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 H0YHG0 523 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 CHST1O43916 411 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 ATP6V1G2O95670 118 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 CGB3P0DN86 165 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 CGB7P0DN87 165 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 MAP2K4P45985 399 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 RBM11P57052 281 aaKnown RBP14.65□□□□□ -0.06
COL9A3-214ENST00000490398 BDH1Q02338 343 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 SPHARQ15513 63 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 MED22Q15528 200 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 SSX2Q16385 188 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 SLC22A6Q4U2R8 563 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 RSBN1Q5VWQ0 802 aaPredicted RBP14.65□□□□□ -0.06
COL9A3-214ENST00000490398 OLFML2AQ68BL7 652 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 GDPGP1Q6ZNW5 385 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 JAGN1Q8N5M9 183 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 SUMF2Q8NBJ7 301 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 OR13A1Q8NGR1 328 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 OR5R1Q8NH85 324 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 WFDC12Q8WWY7 111 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 TMED9Q9BVK6 235 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 BEX1Q9HBH7 125 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 ZNF286AQ9HBT8 521 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 CKLFQ9UBR5 152 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 FOXJ3Q9UPW0 622 aa14.65□□□□□ -0.06
COL9A3-214ENST00000490398 BTBD17A6NE02 478 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 POM121CA8CG34 1229 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 CRHBPP24387 322 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 ACSM3Q53FZ2 586 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 NHLRC3Q5JS37 347 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 DHRS7BQ6IAN0 325 aaPredicted RBP14.64□□□□□ -0.07
COL9A3-214ENST00000490398 SHISA2Q6UWI4 295 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 GLIPR1L1Q6UWM5 242 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 CCBE1Q6UXH8 406 aaPredicted RBP14.64□□□□□ -0.07
COL9A3-214ENST00000490398 OR4P4Q8NGL7 312 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 CNBD2Q96M20 576 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 SLITRK2Q9H156 845 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 MRPS28Q9Y2Q9 187 aaKnown RBP14.64□□□□□ -0.07
COL9A3-214ENST00000490398 SIGLEC9Q9Y336 463 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 TPRKBQ9Y3C4 175 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 TBL2Q9Y4P3 447 aaKnown RBP14.64□□□□□ -0.07
COL9A3-214ENST00000490398 HILPDAQ9Y5L2 63 aa14.64□□□□□ -0.07
COL9A3-214ENST00000490398 MEIKINA0A087WXM9 373 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 OR7C1O76099 320 aaPredicted RBP14.63□□□□□ -0.07
COL9A3-214ENST00000490398 VHLP40337 213 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 RPL15P61313 204 aaKnown RBP14.63□□□□□ -0.07
COL9A3-214ENST00000490398 FAM189A2Q15884 450 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 FBLN7Q53RD9 439 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 LIPKQ5VXJ0 399 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 SLC35E4Q6ICL7 350 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 HEPN1Q6WQI6 88 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 TMEM104Q8NE00 496 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 FOXRED1Q96CU9 486 aaPredicted RBP14.63□□□□□ -0.07
COL9A3-214ENST00000490398 DPCDQ9BVM2 203 aaPredicted RBP14.63□□□□□ -0.07
COL9A3-214ENST00000490398 CLEC7AQ9BXN2 247 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 TAS2R3Q9NYW6 316 aa14.63□□□□□ -0.07
COL9A3-214ENST00000490398 VWFP04275 2813 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 FUOMA2VDF0 154 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 RGS10O43665 173 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 CSTBP04080 98 aaKnown RBP14.62□□□□□ -0.07
COL9A3-214ENST00000490398 GLP1RP43220 463 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 PROK1P58294 105 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 AANATQ16613 207 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 LRRTM1Q86UE6 522 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 ABHD12Q8N2K0 398 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 TMEM203Q969S6 136 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 MALSU1Q96EH3 234 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 GAL3ST2Q9H3Q3 398 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 BANF2Q9H503 90 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 C16orf95Q9H693 158 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 RNF114Q9Y508 228 aa14.62□□□□□ -0.07
COL9A3-214ENST00000490398 MGAM2Q2M2H8 2515 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 VGLL3A8MV65 326 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 SC5DO75845 299 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 TSPAN9O75954 239 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 IGHV3-7P01780 117 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 RPS25P62851 125 aaKnown RBP14.61□□□□□ -0.07
COL9A3-214ENST00000490398 KIAA2026Q5HYC2 2103 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 HIST2H2BDQ6DRA6 164 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 TMEM91Q6ZNR0 172 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 CEACAM19Q7Z692 300 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 RFESDQ8TAC1 157 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 UBALD1Q8TB05 177 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 MRGPRDQ8TDS7 321 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 LEAP2Q969E1 77 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 KIRREL1Q96J84 757 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms