RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 RAB25P57735 213 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 GRK1Q15835 563 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 KCNJ8Q15842 424 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 FAM201AQ5SY85 155 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 TEX36Q5VZQ5 186 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 STUMQ69YW2 141 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 C11orf71Q6IPW1 123 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 ZNF497Q6ZNH5 498 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 CD177Q8N6Q3 437 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 ANGPTL6Q8NI99 470 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 MRPL30Q8TCC3 161 aaKnown RBP8.4□□□□□ -1.06
USP11-211ENST00000489111 DACT3Q96B18 629 aaPredicted RBP8.4□□□□□ -1.06
USP11-211ENST00000489111 SLC6A7Q99884 636 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 MARVELD1Q9BSK0 173 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 TRAF4Q9BUZ4 470 aaPredicted RBP8.4□□□□□ -1.06
USP11-211ENST00000489111 TMEM165Q9HC07 324 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 Q9N2K0 584 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 SLC2A8Q9NY64 477 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 TRAPPC2LQ9UL33 140 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 LAMP3Q9UQV4 416 aa8.4□□□□□ -1.06
USP11-211ENST00000489111 HIVEP3Q5T1R4 2406 aa8.4□□□□□ -1.07
USP11-211ENST00000489111 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 DOPEY1Q5JWR5 2465 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PPIAL4EA0A075B759 164 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 A0A1W2PPR1 153 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 TMEM82A0PJX8 343 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 A1L4Q6 167 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 TRDCB7Z8K6 153 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PPIAL4DF5H284 164 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 J3QKU1 62 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 ARPC1BO15143 372 aaKnown RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 FABP7O15540 132 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 CD8AP01732 235 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 GYPAP02724 150 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 RLN1P04808 185 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PPIAL4FP0DN26 164 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 IL13RA1P78552 427 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 HLA-DRB3P79483 266 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 TLE4Q04727 773 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 EDDM3AQ14507 147 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 SRSF7Q16629 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP11-211ENST00000489111 Q6ZS49 121 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PEG10Q86TG7 708 aaKnown RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 TGIF2LYQ8IUE0 185 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 ZNF561Q8N587 486 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 TMEM185AQ8NFB2 350 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 CCDC107Q8WV48 283 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 NEU4Q8WWR8 484 aaPredicted RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 SNX22Q96L94 193 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 SLC25A21Q9BQT8 299 aaPredicted RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 ZNF665Q9H7R5 613 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 MYOZ1Q9NP98 299 aaPredicted RBP8.39□□□□□ -1.07
USP11-211ENST00000489111 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 KCNIP1Q9NZI2 227 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 METRNQ9UJH8 293 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 ZNF222Q9UK12 451 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 PPIAL4AQ9Y536 164 aa8.39□□□□□ -1.07
USP11-211ENST00000489111 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 MEIKINA0A087WXM9 373 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 FUOMA2VDF0 154 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 MGST3O14880 152 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 ZNF737O75373 536 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 PEX14O75381 377 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 CTXN2P0C2S0 81 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 ZNF735P0CB33 412 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 OR5H8P0DN80 308 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 RAG2P55895 527 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 BTG1P62324 171 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 TATDN3Q17R31 274 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 KRBOX4Q5JUW0 171 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 C6orf183Q5T699 404 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 SLC35E4Q6ICL7 350 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 C17orf107Q6ZR85 190 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 OVCH2Q7RTZ1 564 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 OR5D13Q8NGL4 314 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 OR4A4PQ8NGN8 299 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 OR6F1Q8NGZ6 308 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 SDSLQ96GA7 329 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 MED30Q96HR3 178 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 GAFA1Q96PS6 74 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 CCL13Q99616 98 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 DNTTIP1Q9H147 329 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 KIF25Q9UIL4 384 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 KMT2BQ9UMN6 2715 aaPredicted RBP8.38□□□□□ -1.07
USP11-211ENST00000489111 CADP27708 2225 aa8.38□□□□□ -1.07
USP11-211ENST00000489111 DIDO1Q9BTC0 2240 aaKnown RBP8.38□□□□□ -1.07
USP11-211ENST00000489111 SMG1Q96Q15 3661 aaKnown RBP8.38□□□□□ -1.07
USP11-211ENST00000489111 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
USP11-211ENST00000489111 K7N7A8 449 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 BET1O15155 118 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms