RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PRKACAP17612 351 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ATF1P18846 271 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 GABRR1P24046 479 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 MPZP25189 248 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 UBE2E1P51965 193 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ELLP55199 621 aaPredicted RBP4.77□□□□□ -1.65
CDHR3-213ENST00000488386 DLX6P56179 175 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 IL24Q13007 206 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 BLMHQ13867 455 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 LRRC36Q1X8D7 754 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 RNASE12Q5GAN4 147 aaKnown RBP4.77□□□□□ -1.65
CDHR3-213ENST00000488386 UTF1Q5T230 341 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 XAF1Q6GPH4 301 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 SLC35E4Q6ICL7 350 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 TMEM219Q86XT9 240 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 LYG1Q8N1E2 194 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ZNF561Q8N587 486 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 TMEM86BQ8N661 226 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 OR4S1Q8NGB4 309 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 OR13C3Q8NGS6 347 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 DYRK2Q92630 601 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 CYYR1Q96J86 154 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 PDCD1LG2Q9BQ51 273 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ZNF649Q9BS31 505 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 DPCDQ9BVM2 203 aaPredicted RBP4.77□□□□□ -1.65
CDHR3-213ENST00000488386 PKIBQ9C010 78 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 DPAGT1Q9H3H5 408 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ZNF696Q9H7X3 374 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 METTL8Q9H825 291 aaKnown RBP4.77□□□□□ -1.65
CDHR3-213ENST00000488386 RASL12Q9NYN1 266 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ZNF581Q9P0T4 197 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ENOPH1Q9UHY7 261 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 GSTK1Q9Y2Q3 226 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 POLDIP2Q9Y2S7 368 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 ORC6Q9Y5N6 252 aa4.77□□□□□ -1.65
CDHR3-213ENST00000488386 LOC100130705A0A1B0GUX0 176 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 BTBD17A6NE02 478 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 SH2D7A6NKC9 451 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR4C45A6NMZ5 311 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 DHRS7CA6NNS2 312 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 K7N7A8 449 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 HSPB6O14558 160 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 PROP1O75360 226 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 GATBO75879 557 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OCM2P0CE71 109 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OCMP0CE72 109 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 UBCP0CG48 685 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 CD24P25063 80 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR3A1P47881 315 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 SOX2P48431 317 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 RBP2P50120 134 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 FUT6P51993 359 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ATP1B3P54709 279 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 MTCP1P56278 107 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 SNRPGP62308 76 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ACTC1P68032 377 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ACTA1P68133 377 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 DEFA6Q01524 100 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 SCN1BQ07699 218 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 DYNC1I2Q13409 638 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 IL18R1Q13478 541 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ALKBH1Q13686 389 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 GRK1Q15835 563 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 FAM189A2Q15884 450 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 SSX2Q16385 188 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ZSCAN26Q16670 478 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 TMEM95Q3KNT9 176 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 FAM209BQ5JX69 171 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 PRAMEF5Q5TYX0 476 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR2G6Q5TZ20 316 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 TMEM244Q5VVB8 128 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 NCR3LG1Q68D85 454 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ASPHD2Q6ICH7 369 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 CCBE1Q6UXH8 406 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 GDPGP1Q6ZNW5 385 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ZBTB49Q6ZSB9 765 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 GDPD3Q7L5L3 318 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 FAM58AQ8N1B3 248 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR2C3Q8N628 320 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ACBD7Q8N6N7 88 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ZNF676Q8N7Q3 588 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ZFP41Q8N8Y5 198 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR51A2Q8NGJ7 313 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR52I1Q8NGK6 324 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR5D13Q8NGL4 314 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR13C5Q8NGS8 318 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR10K1Q8NGX5 313 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 FAM110DQ8TAY7 271 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 CNIH3Q8TBE1 160 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 PIFOQ8TCI5 191 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 RGP1Q92546 391 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 RBMXL1Q96E39 390 aaKnown RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OPALINQ96PE5 141 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 OR5M11Q96RB7 305 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 NR1H4Q96RI1 486 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-213ENST00000488386 CITED1Q99966 193 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 NEK6Q9HC98 313 aa4.76□□□□□ -1.65
CDHR3-213ENST00000488386 HEYLQ9NQ87 328 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms