RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 SPNS3Q6ZMD2 512 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 EXTL1Q92935 676 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 SMDT1Q9H4I9 107 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 H3BP45 60 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 NDUFS6O75380 124 aaKnown RBP14.09□□□□□ -0.15
GCOM1-210ENST00000488175 IGHV3-9P01782 118 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 CDX1P47902 265 aaPredicted RBP14.09□□□□□ -0.15
GCOM1-210ENST00000488175 RAC1P63000 192 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 GFI1BQ5VTD9 330 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 TMEM56Q96MV1 263 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 SLC25A31Q9H0C2 315 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 WNT5BQ9H1J7 359 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 PCED1AQ9H1Q7 454 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 PARPBPQ9NWS1 579 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 HS3ST3B1Q9Y662 390 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 TMEM56-RWDD3S4R434 201 aa14.09□□□□□ -0.15
GCOM1-210ENST00000488175 CEACAM16Q2WEN9 425 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 CPNE4Q96A23 557 aaPredicted RBP14.08□□□□□ -0.16
GCOM1-210ENST00000488175 SIGLEC12Q96PQ1 595 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 UNKLQ9H9P5 680 aaKnown RBP14.08□□□□□ -0.16
GCOM1-210ENST00000488175 IL36RNQ9UBH0 155 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 CYB5BO43169 146 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 SPINK2P20155 84 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 EXT1Q16394 746 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 AKR1C8PQ5T2L2 129 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 AAED1Q7RTV5 226 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 IL22RA1Q8N6P7 574 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 ZNF610Q8N9Z0 462 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 DNASE2BQ8WZ79 361 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 OR2H1Q9GZK4 316 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 CCL28Q9NRJ3 127 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 IL36GQ9NZH8 169 aa14.08□□□□□ -0.16
GCOM1-210ENST00000488175 PTRH2Q9Y3E5 179 aaKnown RBP14.08□□□□□ -0.16
GCOM1-210ENST00000488175 CELSR3Q9NYQ7 3312 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 IGHV1-45A0A0A0MS14 117 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 A0A0G2JMM0 328 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 A0A1W2PPB8 328 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 A0A1W2PRS3 328 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 KIR3DP1A8MWS1 328 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 TRGC2P03986 189 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 EDN3P14138 238 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 IGFBP4P22692 258 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 S100A2P29034 98 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 SSR4P51571 173 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 RPS18P62269 152 aaKnown RBP14.07□□□□□ -0.16
GCOM1-210ENST00000488175 RPL23AP62750 156 aaKnown RBP14.07□□□□□ -0.16
GCOM1-210ENST00000488175 SRPXP78539 464 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 CMTM1Q8IZ96 169 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 FOXB1Q99853 325 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 NIPSNAP3BQ9BS92 247 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 GAR1Q9NY12 217 aaKnown RBP14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BKO60814 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 TK1P04183 234 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BJP06899 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 UMODP07911 640 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 BCL3P20749 454 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BOP23527 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BBP33778 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 CARD18P57730 90 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BDP58876 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BCP62807 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HERPUD1Q15011 391 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 OR8B8Q15620 311 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST2H2BEQ16778 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.07□□□□□ -0.16
GCOM1-210ENST00000488175 SLC23A3Q6PIS1 610 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 ZNF383Q8NA42 475 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 CLDND2Q8NHS1 167 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BHQ93079 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 TVP23CQ96ET8 276 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 PFDN5Q99471 154 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 SPIN2AQ99865 258 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BNQ99877 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 HIST1H2BMQ99879 126 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 SPIN2BQ9BPZ2 258 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 CALHM2Q9HA72 323 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 PLSCR2Q9NRY7 297 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 DMRT1Q9Y5R6 373 aa14.07□□□□□ -0.16
GCOM1-210ENST00000488175 LY6G6EA0A0G2JKS1 128 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 ZNF816-ZNF321PA0A0X1KG74 233 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 SLC22A20A6NK97 555 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 CXCL13O43927 109 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 CCNOP22674 350 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 ID3Q02535 119 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 IZUMO4Q1ZYL8 232 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 OR10D4PQ8NGN7 298 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
GCOM1-210ENST00000488175 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 CRIM1Q9NZV1 1036 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 U3KQA8 63 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 BTBD17A6NE02 478 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 ZNF732B4DXR9 585 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 C3orf80F5H4A9 247 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 WRBO00258 174 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 LY86O95711 162 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 RAC3P60763 192 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 NMSQ5H8A3 153 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 WDR5BQ86VZ2 330 aa14.06□□□□□ -0.16
GCOM1-210ENST00000488175 THNSL2Q86YJ6 484 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms