RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 UBE2QL1A1L167 161 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 LDLRAD4O15165 306 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 SOCS1O15524 211 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 ZNF780AO75290 641 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 EPHA1P21709 976 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 GALP22466 123 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 ALDH3B2P48448 385 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 BMXP51813 675 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 NCS1P62166 190 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 KRBOX4Q5JUW0 171 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 NKAPLQ5M9Q1 402 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 RSBN1Q5VWQ0 802 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 FAM53AQ6NSI3 398 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 OR13A1Q8NGR1 328 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 C17orf50Q8WW18 174 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 MRPS26Q9BYN8 205 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 VCX3AQ9NNX9 186 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 KPTNQ9Y664 436 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 ODAMA1E959 279 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 FAM172BPA6NC97 362 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 IFITM5A6NNB3 132 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 PDCD5O14737 125 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 AIREO43918 545 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 BPNT1O95861 308 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 SNRPBP14678 240 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 ARSBP15848 533 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 OMGP23515 440 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 COX7A1P24310 79 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 RPS27AP62979 156 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 PRAMEF5Q5TYX0 476 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 RAB12Q6IQ22 244 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 SLC16A12Q6ZSM3 486 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 OR5D13Q8NGL4 314 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 CCDC107Q8WV48 283 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 KCTD7Q96MP8 289 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 RCC2Q9P258 522 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 NUP50Q9UKX7 468 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 PEX16Q9Y5Y5 336 aa14.03□□□□□ -0.16
SHROOM1-205ENST00000488072 PAHP00439 452 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 GPR176Q14439 515 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 MOGAT2Q3SYC2 334 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 C6orf201Q7Z4U5 140 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 CHST4Q8NCG5 386 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 SULT4A1Q9BR01 284 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 TMEM59Q9BXS4 323 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 OCEL1Q9H607 264 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 DAPK2Q9UIK4 370 aa14.02□□□□□ -0.17
SHROOM1-205ENST00000488072 MEIKINA0A087WXM9 373 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 C17orf98A8MV24 154 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 M0R1W7 72 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 UBBP0CG47 229 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 ZNF728P0DKX0 622 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 ERP29P30040 261 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 RPS19P39019 145 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 VBP1P61758 197 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 C17orf58Q2M2W7 97 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 MPV17LQ2QL34 196 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 C11orf91Q3C1V1 193 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 GPR107Q5VW38 600 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 OLFML2AQ68BL7 652 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 TRAPPC6BQ86SZ2 158 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 KIR3DL3Q8N743 410 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 SIGLECL1Q8N7X8 197 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 OR5H6Q8NGV6 325 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 RFESDQ8TAC1 157 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 KCNG3Q8TAE7 436 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 PPP1R35Q8TAP8 253 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 MRGPRDQ8TDS7 321 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 NEK7Q8TDX7 302 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 FAAP24Q9BTP7 215 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 TM2D1Q9BX74 207 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 CST11Q9H112 138 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 IFT22Q9H7X7 185 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 LIN7BQ9HAP6 207 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 GHRLQ9UBU3 117 aa14.01□□□□□ -0.17
SHROOM1-205ENST00000488072 C2CD3Q4AC94 2353 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 IGHV1-69DA0A0B4J2H0 117 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 hADV38S2A0JD32 116 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 FOXI3A8MTJ6 420 aaPredicted RBP14□□□□□ -0.17
SHROOM1-205ENST00000488072 NOTOA8MTQ0 251 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 AIPO00170 330 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 IGHV1-69P01742 117 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 IGHV3-7P01780 117 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 PRTN3P24158 256 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 CHATP28329 748 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 GLP1RP43220 463 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 VEGFCP49767 419 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 TMEM50BP56557 158 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 MEF2CQ06413 473 aaPredicted RBP14□□□□□ -0.17
SHROOM1-205ENST00000488072 LTC4SQ16873 150 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 DEFB112Q30KQ8 113 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 LDLRAD2Q5SZI1 272 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 SFXN4Q6P4A7 337 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 Q6ZPA2 131 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 OR4K15Q8NH41 348 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 MRPS24Q96EL2 167 aaKnown RBP14□□□□□ -0.17
SHROOM1-205ENST00000488072 ZNF714Q96N38 554 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 DUX5Q96PT3 197 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms