RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 Q8N7P7 452 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 ZNF565Q8N9K5 539 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 Q96M66 194 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 NKX3-1Q99801 234 aaPredicted RBP12.02□□□□□ -0.49
LIMS3-205ENST00000487150 SLC6A7Q99884 636 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 DPCDQ9BVM2 203 aaPredicted RBP12.02□□□□□ -0.49
LIMS3-205ENST00000487150 SELENOIQ9C0D9 397 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 PPIL3Q9H2H8 161 aaKnown RBP12.02□□□□□ -0.49
LIMS3-205ENST00000487150 ZNF69Q9UC07 566 aa12.02□□□□□ -0.49
LIMS3-205ENST00000487150 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 WNK2Q9Y3S1 2297 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM30CPA0ZSE6 113 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 C17orf98A8MV24 154 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 MCRIP1C9JLW8 97 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 HSPB6O14558 160 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 MPIG6BO95866 241 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 CD36P16671 472 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 RAB3BP20337 219 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 TAF9Q16594 264 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 ATAD3CQ5T2N8 411 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 SUMF2Q8NBJ7 301 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM158Q8WZ71 300 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 CORO2AQ92828 525 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 C1orf147Q96MC9 270 aaPredicted RBP12.01□□□□□ -0.49
LIMS3-205ENST00000487150 KCTD7Q96MP8 289 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
LIMS3-205ENST00000487150 STEAP1Q9UHE8 339 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 FAM96BQ9Y3D0 163 aa12.01□□□□□ -0.49
LIMS3-205ENST00000487150 IGHV3OR16-10A0A075B7F0 116 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 MEIKINA0A087WXM9 373 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
LIMS3-205ENST00000487150 TRIM77I1YAP6 450 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 AIPO00170 330 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 NPFFO15130 113 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM127O75204 238 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 PDCD6O75340 191 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 PAHP00439 452 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 FBP1P09467 338 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 CCL3L1P16619 93 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 FUT3P21217 361 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 RPS27AP62979 156 aaKnown RBP12□□□□□ -0.49
LIMS3-205ENST00000487150 AESQ08117 197 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 NEDD4LQ96PU5 975 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 BANF2Q9H503 90 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 TXNL4BQ9NX01 149 aaKnown RBP12□□□□□ -0.49
LIMS3-205ENST00000487150 FBLN5Q9UBX5 448 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 AK6Q9Y3D8 172 aaKnown RBP12□□□□□ -0.49
LIMS3-205ENST00000487150 SESN1Q9Y6P5 492 aa12□□□□□ -0.49
LIMS3-205ENST00000487150 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TRIM64CA6NLI5 447 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 IFITM5A6NNB3 132 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 RNASEK-C17orf49H0YIS7 233 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 IGHV1-8P0DP01 117 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
LIMS3-205ENST00000487150 GLP1RP43220 463 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 DLX6P56179 175 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 LGALS4P56470 323 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TUSC1Q2TAM9 212 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM30BQ3MIR4 351 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 RSBN1Q5VWQ0 802 aaPredicted RBP11.99□□□□□ -0.49
LIMS3-205ENST00000487150 SLC35E4Q6ICL7 350 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 RAB12Q6IQ22 244 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TRAT1Q6PIZ9 186 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 BRD3OSQ6XYD6 125 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM86BQ8N661 226 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 C22orf15Q8WYQ4 148 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TNFRSF14Q92956 283 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 FAM46BQ96A09 425 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 FAM3DQ96BQ1 224 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 COQ2Q96H96 371 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 TM2D1Q9BX74 207 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 SVEP1Q4LDE5 3571 aa11.99□□□□□ -0.49
LIMS3-205ENST00000487150 A0A1W2PP11 408 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 NOTOA8MTQ0 251 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 TMEM14DPA8MWL7 114 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 CLDN34H7C241 214 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 GZMHP20718 246 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 GLIPR1P48060 266 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 RTN4RL2Q86UN3 420 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 TPRX1Q8N7U7 411 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 SIGLECL1Q8N7X8 197 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 OR10A7Q8NGE5 316 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 CREB3L1Q96BA8 519 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 CHCHD6Q9BRQ6 235 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 ETAA1Q9NY74 926 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 KIF25Q9UIL4 384 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 PEX16Q9Y5Y5 336 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 POMT1Q9Y6A1 747 aa11.98□□□□□ -0.49
LIMS3-205ENST00000487150 LOC100506127A0A0U1RQW1 187 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms