RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ELFN2Q5R3F8 820 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 C6orf141Q5SZD1 244 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 CD276Q5ZPR3 534 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 C22orf42Q6IC83 251 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR8G2PQ6IF36 304 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 PRR27Q6MZM9 219 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LPCAT3Q6P1A2 487 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RNF165Q6ZSG1 346 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 APRG1Q8IVJ8 170 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ZIC4Q8N9L1 334 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR7A2PQ8NGA2 310 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR5D16Q8NGK9 328 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR4D5Q8NGN0 318 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR52I2Q8NH67 350 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ISOC2Q96AB3 205 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RAB39BQ96DA2 213 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 SGK494Q96LW2 274 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF75AQ96N20 296 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 DDOQ99489 341 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 EBF4Q9BQW3 602 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 TAPBPLQ9BX59 468 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LINC00470Q9BZP3 86 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 COMMD4Q9H0A8 199 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 TPT1P8Q9HAU6 139 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 BEX1Q9HBH7 125 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 HMG20AQ9NP66 347 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 EXOSC3Q9NQT5 275 aaKnown RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ING3Q9NXR8 418 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ARMCX1Q9P291 453 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 KCNE5Q9UJ90 142 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 CENPVL1A0A0U1RR11 272 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM72A0PK05 275 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DCTN6O00399 190 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 PLPP2O43688 288 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 HPGDSO60760 199 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 KHDRBS3O75525 346 aaKnown RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 MPZL1O95297 269 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 TSPAN13O95857 204 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ISG15P05161 165 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF20P17024 532 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 CELP19835 753 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 EDN2P20800 178 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 NR4A1P22736 598 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ANOS1P23352 680 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 PRTN3P24158 256 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 CXCR1P25024 350 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 GLRXP35754 106 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 RAB7AP51149 207 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 CAV2P51636 162 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DNAJB13P59910 316 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 COPZ1P61923 177 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 RPS23P62266 143 aaKnown RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 MS4A2Q01362 244 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF91Q05481 1191 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZP4Q12836 540 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 CEACAM7Q14002 265 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR7A5Q15622 319 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZBED5Q49AG3 693 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 LINC01620Q4KN68 170 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DNLZQ5SXM8 178 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM42Q69YG0 159 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 UQCC3Q6UW78 93 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DRAM2Q6UX65 266 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 C16orf89Q6UX73 402 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF367Q7RTV3 350 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 C6orf120Q7Z4R8 191 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 IGFN1Q86VF2 1251 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 CARM1Q86X55 608 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ERI1Q8IV48 349 aaKnown RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR6V1Q8N148 313 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 JAGN1Q8N5M9 183 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM99Q8N816 258 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR13D1Q8NGV5 346 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR10K1Q8NGX5 313 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR52E5Q8NH55 327 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 RNASEH2CQ8TDP1 164 aaKnown RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 XAGE5Q8WWM1 108 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DNAJC9Q8WXX5 260 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 SLC35G5Q96KT7 338 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ALKBH3Q96Q83 286 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR5M11Q96RB7 305 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 DPY30Q9C005 99 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF385DQ9H6B1 395 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ARMC7Q9H6L4 198 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 SEC61A2Q9H9S3 476 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 NOX3Q9HBY0 568 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ESM1Q9NQ30 184 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 MIOXQ9UGB7 285 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 MRPS28Q9Y2Q9 187 aaKnown RBP5.69□□□□□ -1.5
HDAC3-209ENST00000486618 HSPB11Q9Y547 144 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 ARHGAP32A7KAX9 2087 aa5.69□□□□□ -1.5
HDAC3-209ENST00000486618 OR6C68A6NDL8 312 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 G3V2L1 256 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 RPL36A-HNRNPH2H7BZ11 118 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 WNT9BO14905 357 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 PPP1R2P9O14990 202 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SHOX2O60902 331 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 RP2O75695 350 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF432O94892 652 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms