RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CCDC71LQ8N9Z2 235 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 POC1AQ8NBT0 407 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 OR10Z1Q8NGY1 313 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 OR2V1Q8NHB1 315 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 MRGPRFQ96AM1 343 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 GMPPAQ96IJ6 420 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 ARHGAP5-AS1Q96IT6 56 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 NICN1Q9BSH3 213 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 SF3B5Q9BWJ5 86 aaKnown RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 PECRQ9BY49 303 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 RGCCQ9H4X1 137 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 C5orf66Q9H5L9 145 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 PNRC2Q9NPJ4 139 aaKnown RBP7.76□□□□□ -1.17
COL12A1-208ENST00000486533 NECAP2Q9NVZ3 263 aa7.76□□□□□ -1.17
COL12A1-208ENST00000486533 A0A0J9YW62 118 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 A0A1W2PPR1 153 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 K7EPK0 472 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SMAD9O15198 467 aaKnown RBP7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SOCS1O15524 211 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 PLATP00750 562 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 PMELP40967 661 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 RAB5CP51148 216 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 F2RL1P55085 397 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 S100A10P60903 97 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 PCBD1P61457 104 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 HIST1H3AP68431 136 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 GUSBP1Q15486 140 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SLC9A3R2Q15599 337 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 OR8B8Q15620 311 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 ABCA11PQ4W5N1 156 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 PLAC9Q5JTB6 97 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 HIST2H3PS2Q5TEC6 136 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 CARD17Q5XLA6 110 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 DHRS7BQ6IAN0 325 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-208ENST00000486533 UNQ6126/PRO20091Q6UXV3 157 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 LHFPL2Q6ZUX7 228 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 HIST2H3AQ71DI3 136 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SEMA6DQ8NFY4 1073 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 OR13G1Q8NGZ3 307 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 ADGRG7Q96K78 797 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 NKX3-1Q99801 234 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-208ENST00000486533 MICU1Q9BPX6 476 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SYT3Q9BQG1 590 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 SUCNR1Q9BXA5 334 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 BANF2Q9H503 90 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 C12orf49Q9H741 205 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 ROS1P08922 2347 aa7.75□□□□□ -1.17
COL12A1-208ENST00000486533 ARID1AO14497 2285 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 A0A0A6YYD4 124 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 DEFB108AA8MXU0 73 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 E5RGE8 158 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 M0R135 149 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 RER1O15258 196 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 DHHO43323 396 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 SS18L1O75177 396 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 HEXAP06865 529 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 CRYGSP22914 178 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 GLP1RP43220 463 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 SULT1A2P50226 295 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 CAV2P51636 162 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 CARD18P57730 90 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 MRPS34P82930 218 aaKnown RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 RSU1Q15404 277 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 FAM185AQ8N0U4 392 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 TMEM104Q8NE00 496 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ROBO4Q8WZ75 1007 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 CPNE4Q96A23 557 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 TMEM230Q96A57 120 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF799Q96GE5 643 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ST6GALNAC5Q9BVH7 336 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ULBP2Q9BZM5 246 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 SLC5A7Q9GZV3 580 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 MS4A7Q9GZW8 240 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 UBTD1Q9HAC8 227 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ELL3Q9HB65 397 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 TAF9BQ9HBM6 251 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 BIN3Q9NQY0 253 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 PLSCR4Q9NRQ2 329 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 GLRX2Q9NS18 164 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 FAM212BQ9NTI7 297 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF701Q9NV72 531 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 PLEKHJ1Q9NW61 149 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 SLC7A11Q9UPY5 501 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 PIGLQ9Y2B2 252 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 NSG2Q9Y328 171 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 STRAPQ9Y3F4 350 aaKnown RBP7.74□□□□□ -1.17
COL12A1-208ENST00000486533 KPTNQ9Y664 436 aa7.74□□□□□ -1.17
COL12A1-208ENST00000486533 A0A1W2PNR3 127 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 FOXI3A8MTJ6 420 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-208ENST00000486533 NDUFA2O43678 99 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 CST2P09228 141 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 SERPINA2P20848 420 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 OTX1P32242 354 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms