RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 COPS4Q9BT78 406 aa1.55□□□□□ -2.16
LTN1-206ENST00000486427 OR2D2Q9H210 308 aa1.55□□□□□ -2.16
LTN1-206ENST00000486427 OR5V1Q9UGF6 321 aa1.55□□□□□ -2.16
LTN1-206ENST00000486427 CLEC2DQ9UHP7 191 aa1.55□□□□□ -2.16
LTN1-206ENST00000486427 POLR3AO14802 1390 aaPredicted RBP1.55□□□□□ -2.16
LTN1-206ENST00000486427 TRAV8-3A0A0A6YYJ7 113 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 G3V3Q6 166 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 M0QXV9 152 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 TCF21O43680 179 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 ENSAO43768 121 aaKnown RBP1.54□□□□□ -2.16
LTN1-206ENST00000486427 CA2P00918 260 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 PLTPP55058 493 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 BCL2A1Q16548 175 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 GOLGA7BQ2TAP0 167 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 C18orf21Q32NC0 220 aaPredicted RBP1.54□□□□□ -2.16
LTN1-206ENST00000486427 ZIC4Q8N9L1 334 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 OR10D4PQ8NGN7 298 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 TWIST2Q8WVJ9 160 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 SUCNR1Q9BXA5 334 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 ULBP1Q9BZM6 244 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 SLC25A31Q9H0C2 315 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 CYB5R1Q9UHQ9 305 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 NAGKQ9UJ70 344 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 ARAP3Q8WWN8 1544 aa1.54□□□□□ -2.16
LTN1-206ENST00000486427 TRBV24-1A0A075B6N3 115 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 IGHV1-45A0A0A0MS14 117 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 IGHV2-26A0A0B4J1V2 119 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 MGAT4DA6NG13 374 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 H3BP45 60 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 hCG_2039718K7EN88 272 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 PDCD6O75340 191 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 POP7O75817 140 aaKnown RBP1.53□□□□□ -2.16
LTN1-206ENST00000486427 SOX14O95416 240 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 SLC2A1P11166 492 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 GZMHP20718 246 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 CCNOP22674 350 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 CRABP2P29373 138 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 GTF2H1P32780 548 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 RANBP1P43487 201 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 ZCWPW2Q504Y3 356 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 Q6ZT83 130 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 HS3ST5Q8IZT8 346 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 OR8G5Q8NG78 346 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 OR4K17Q8NGC6 315 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.53□□□□□ -2.16
LTN1-206ENST00000486427 LRRC39Q96DD0 335 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 PITX2Q99697 317 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 HINT2Q9BX68 163 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 RAB1BQ9H0U4 201 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 MFSD1Q9H3U5 465 aa1.53□□□□□ -2.16
LTN1-206ENST00000486427 RBMX2Q9Y388 322 aaKnown RBP1.53□□□□□ -2.16
LTN1-206ENST00000486427 KMT2EQ8IZD2 1858 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 A6NED7 52 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 OR5H14A6NHG9 310 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 TMEM250H0YL14 139 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 GPR75O95800 540 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 GIMD1P0DJR0 217 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 ZNF22P17026 224 aaPredicted RBP1.52□□□□□ -2.17
LTN1-206ENST00000486427 TSPOP30536 169 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 MMDQ15546 238 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 PYCR3Q53H96 274 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 NXNL2Q5VZ03 156 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 HBMQ6B0K9 141 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 MSRB3Q8IXL7 192 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 SLC25A45Q8N413 288 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 OR2AE1Q8NHA4 323 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 CMBLQ96DG6 245 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 ZMYND19Q96E35 227 aaPredicted RBP1.52□□□□□ -2.17
LTN1-206ENST00000486427 CPB2Q96IY4 423 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 TSSK6Q9BXA6 273 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
LTN1-206ENST00000486427 DOCK6Q96HP0 2047 aa1.52□□□□□ -2.17
LTN1-206ENST00000486427 A0A1B0GTI1 187 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 CDIPTO14735 213 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 SPOPO43791 374 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 SHOX2O60902 331 aaPredicted RBP1.51□□□□□ -2.17
LTN1-206ENST00000486427 HBG1P69891 147 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 HBG2P69892 147 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 FOXF1Q12946 379 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 CEACAM21Q3KPI0 293 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 ELP2Q6IA86 826 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 LAMTOR1Q6IAA8 161 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 LAIR2Q6ISS4 152 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 ZNF322Q6U7Q0 402 aaPredicted RBP1.51□□□□□ -2.17
LTN1-206ENST00000486427 CLEC20AQ6ZU45 233 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 ST13P4Q8IZP2 240 aaPredicted RBP1.51□□□□□ -2.17
LTN1-206ENST00000486427 CDRT4Q8N9R6 151 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 OR2Y1Q8NGV0 311 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 CASTOR1Q8WTX7 329 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 OR8B2Q96RD0 313 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 TMBIM4Q9HC24 238 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 NXT1Q9UKK6 140 aaKnown RBP1.51□□□□□ -2.17
LTN1-206ENST00000486427 LINC00588Q9Y4M8 146 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 USH1CQ9Y6N9 552 aa1.51□□□□□ -2.17
LTN1-206ENST00000486427 FAM183AA6NL82 134 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 NDUFS8O00217 210 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 PLPP3O14495 311 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms