RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SLC37A3Q8NCC5 494 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 OR8J3Q8NGG0 315 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 OR4D6Q8NGJ1 314 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 RGP1Q92546 391 aaPredicted RBP6.2□□□□□ -1.42
XRN1-212ENST00000486211 FLYWCH2Q96CP2 140 aaKnown RBP6.2□□□□□ -1.42
XRN1-212ENST00000486211 C16orf45Q96MC5 204 aaPredicted RBP6.2□□□□□ -1.42
XRN1-212ENST00000486211 CCDC28BQ9BUN5 200 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 CCDC134Q9H6E4 229 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 SRD5A3Q9H8P0 318 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 OR6C3Q9NZP0 311 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 ZNF107Q9UII5 783 aaPredicted RBP6.2□□□□□ -1.42
XRN1-212ENST00000486211 PSG11Q9UQ72 335 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 PIGLQ9Y2B2 252 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 ENPP4Q9Y6X5 453 aa6.2□□□□□ -1.42
XRN1-212ENST00000486211 TRAV41A0A0B4J266 112 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 ODAMA1E959 279 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 MSGN1A6NI15 193 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 FAM220BPB1ANY3 271 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 ZNF736B4DX44 427 aaPredicted RBP6.19□□□□□ -1.42
XRN1-212ENST00000486211 HSD17B6O14756 317 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 ARPC1BO15143 372 aaKnown RBP6.19□□□□□ -1.42
XRN1-212ENST00000486211 SHOXO15266 292 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 TPPPO94811 219 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 CD7P09564 240 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 DUSP1P28562 367 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 REG1BP48304 166 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
XRN1-212ENST00000486211 AESQ08117 197 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 RAB40BQ12829 278 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 CRMP1Q14194 572 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 ZNF146Q15072 292 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 MOB3BQ86TA1 216 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 Q8N402 240 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 ANKRD42Q8N9B4 389 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 OR8H1Q8NGG4 311 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 OR6K6Q8NGW6 343 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 OR6N2Q8NGY6 317 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 HAVCR2Q8TDQ0 301 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 CASTOR1Q8WTX7 329 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 SLAMF9Q96A28 289 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 COQ2Q96H96 371 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 NEURL2Q9BR09 285 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 PLEKHA1Q9HB21 404 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 MRM2Q9UI43 246 aaKnown RBP6.19□□□□□ -1.42
XRN1-212ENST00000486211 ENPP5Q9UJA9 477 aa6.19□□□□□ -1.42
XRN1-212ENST00000486211 IGKV1-27A0A075B6S5 117 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 KBTBD11-OT1A0A1B0GTJ5 212 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 ZNF729A6NN14 1252 aaPredicted RBP6.18□□□□□ -1.42
XRN1-212ENST00000486211 DLGAP1O14490 977 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 NDUFB8O95169 186 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 ZNF682O95780 498 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 MOSP00540 346 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 IGHV3-11P01762 117 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 SLC2A2P11168 524 aaPredicted RBP6.18□□□□□ -1.42
XRN1-212ENST00000486211 RHCEP18577 417 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 CD1BP29016 333 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 GSSP48637 474 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 ZNF45Q02386 682 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 CLVS2Q5SYC1 327 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 CYP4Z1Q86W10 505 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 ERI1Q8IV48 349 aaKnown RBP6.18□□□□□ -1.42
XRN1-212ENST00000486211 OR9G4Q8NGQ1 327 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 OR51E1Q8TCB6 317 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 EMG1Q92979 244 aaKnown RBP6.18□□□□□ -1.42
XRN1-212ENST00000486211 INTS14Q96SY0 518 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 TEAD3Q99594 435 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 SH3GL1Q99961 368 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 CADM1Q9BY67 442 aaKnown RBP6.18□□□□□ -1.42
XRN1-212ENST00000486211 GPR84Q9NQS5 396 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 FAM206AQ9NX38 181 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 NDE1Q9NXR1 346 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 NDUFAF4Q9P032 175 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 GLS2Q9UI32 602 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
XRN1-212ENST00000486211 IGHV7-81A0A0B4J1V7 117 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 OR11H12B2RN74 326 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 SIRPB1O00241 398 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 RGS16O15492 202 aaPredicted RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 XRCC3O43542 346 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 ENTPD6O75354 484 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 DHRS3O75911 302 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 INMTO95050 263 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 GAPDHP04406 335 aaKnown RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 CSN3P07498 182 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 BLVRBP30043 206 aaPredicted RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 NPBWR2P48146 333 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 GNG10P50151 68 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 BLVRAP53004 296 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 CDC42P60953 191 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 KLF5Q13887 457 aaPredicted RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 CYLC2Q14093 348 aaPredicted RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 SHFQ7M4L6 423 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 LAX1Q8IWV1 398 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 ENTHD1Q8IYW4 607 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 GVQW1Q8N7I0 195 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 OR2T12Q8NG77 320 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 OR8D4Q8NGM9 314 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 OR52J3Q8NH60 311 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms