RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MEIKINA0A087WXM9 373 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM82A0PJX8 343 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ODAMA1E959 279 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM14DPA8MWL7 114 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 PDCD6O75340 191 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF728P0DKX0 622 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 SMIM18P0DKX4 95 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 AMY2BP19961 511 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 PRTN3P24158 256 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 BLVRBP30043 206 aaPredicted RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 SOX6P35712 828 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 OR3A1P47881 315 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ALDH3B2P48448 385 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 CEBPDP49716 269 aaPredicted RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 RORCP51449 518 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TMBIM6P55061 237 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ERVFRD-1P60508 538 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 RPS27AP62979 156 aaKnown RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 HOXA4Q00056 320 aaPredicted RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 PAX5Q02548 391 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 PAX2Q02962 417 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 MXD1Q05195 221 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 HNRNPA0Q13151 305 aaKnown RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 GPR107Q5VW38 600 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 SLC35E4Q6ICL7 350 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 Q6P435 159 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 SFXN4Q6P4A7 337 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 MZT2AQ6P582 158 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 C17orf107Q6ZR85 190 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 USP43Q70EL4 1123 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 OR4M1Q8NGD0 313 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 OR51D1Q8NGF3 324 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ACOT12Q8WYK0 555 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 CORO2AQ92828 525 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 FAM46BQ96A09 425 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 KCTD12Q96CX2 325 aaKnown RBP6.83□□□□□ -1.32
SF3A1-208ENST00000485618 Q96M66 194 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF714Q96N38 554 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TM2D1Q9BX74 207 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 PPA2Q9H2U2 334 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 DIABLOQ9NR28 239 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 OPN4Q9UHM6 478 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 DAPK2Q9UIK4 370 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 NUP50Q9UKX7 468 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 MGAT4AQ9UM21 535 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 STAB1Q9NY15 2570 aa6.83□□□□□ -1.32
SF3A1-208ENST00000485618 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 SMIM31A0A1B0GVY4 71 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 A0A1B0GW55 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 C22orf46C9J442 243 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 HSPB6O14558 160 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 PSPNO60542 156 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TFAP2AP05549 437 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 FAM157CP0CG43 387 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L2P0CJ85 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L3P0CJ86 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L4P0CJ87 422 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L5P0CJ88 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L6P0CJ89 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L7P0CJ90 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TALDO1P37837 337 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 RBMXP38159 391 aaKnown RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 SERPINB10P48595 397 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 LGALS4P56470 323 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 LSM3P62310 102 aaKnown RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 AESQ08117 197 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DYNC1I2Q13409 638 aaKnown RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 C6orf183Q5T699 404 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4L9Q6RFH8 374 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 SLC16A12Q6ZSM3 486 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 Q6ZTK2 550 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 RNF144BQ7Z419 303 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 BPIFB2Q8N4F0 458 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM104Q8NE00 496 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 OR4S1Q8NGB4 309 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 OR10A7Q8NGE5 316 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 OR13D1Q8NGV5 346 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF418Q8TF45 676 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 SLC25A28Q96A46 364 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 CREB3L1Q96BA8 519 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TMPRSS13Q9BYE2 586 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 MS4A7Q9GZW8 240 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 UNKLQ9H9P5 680 aaKnown RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 CHMP1AQ9HD42 196 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 ETAA1Q9NY74 926 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 NDUFA13Q9P0J0 144 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 RCC2Q9P258 522 aaKnown RBP6.82□□□□□ -1.32
SF3A1-208ENST00000485618 IL36RNQ9UBH0 155 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 DUX4Q9UBX2 424 aa6.82□□□□□ -1.32
SF3A1-208ENST00000485618 TRAPPC2LQ9UL33 140 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms