RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ISG20L2Q9H9L3 353 aaKnown RBP15.27■□□□□ 0.04
COL27A1-205ENST00000485397 KIF25Q9UIL4 384 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 MOB4Q9Y3A3 225 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 HSPE1-MOB4S4R3N1 261 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 PSMB11A5LHX3 300 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A18PA6NE21 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A16PA6NEW6 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A20PA6NIJ5 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A9PA6NNJ1 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A12PA8MX19 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A5PA8MXJ8 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 M0QZK8 103 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 EI24O14681 340 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 SULT1B1O43704 296 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 SNRNP70P08621 437 aaKnown RBP15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A15PP0C7V4 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A13PP0C7W8 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A14PP0C7W9 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM90A24PP0C7X0 464 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 FAM106CPP0CH98 169 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 DBTP11182 482 aaKnown RBP15.26■□□□□ 0.03
COL27A1-205ENST00000485397 HOXD3P31249 432 aaPredicted RBP15.26■□□□□ 0.03
COL27A1-205ENST00000485397 MTNR1BP49286 362 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 DIAPH2-AS1Q14236 149 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 ZSCAN26Q16670 478 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 DEFB121Q5J5C9 76 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 ZNF691Q5VV52 312 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 LPCAT4Q643R3 524 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 ZNF329Q86UD4 541 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 LINC00482Q8N8I6 264 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 OR51T1Q8NGJ9 327 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 OR56B4Q8NH76 319 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 TOMM40LQ969M1 308 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 CALYQ9NYX4 217 aa15.26■□□□□ 0.03
COL27A1-205ENST00000485397 MEIKINA0A087WXM9 373 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 TRAV24A0A0B4J272 114 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 E9PI62 339 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 J3QR06 171 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 ATP5HO75947 161 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 ZFPL1O95159 310 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 CLIC3O95833 236 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 GALEQ14376 348 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 LTC4SQ16873 150 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 PAN3Q58A45 887 aaKnown RBP15.25■□□□□ 0.03
COL27A1-205ENST00000485397 VAX1Q5SQQ9 334 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 ETV3LQ6ZN32 361 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 SERPINA12Q8IW75 414 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 PARP16Q8N5Y8 322 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 DRAM1Q8N682 238 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 OR5D14Q8NGL3 314 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 RFESDQ8TAC1 157 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 PDCD1LG2Q9BQ51 273 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 IDI2-AS1Q9NZ38 188 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 DNAH9Q9NYC9 4486 aa15.25■□□□□ 0.03
COL27A1-205ENST00000485397 CIB2O75838 187 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 DUS4LO95620 317 aaKnown RBP15.24■□□□□ 0.03
COL27A1-205ENST00000485397 GABRB1P18505 474 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 ELP2Q6IA86 826 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 C11orf87Q6NUJ2 197 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 C18orf65Q6ZTR6 163 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 MRPL41Q8IXM3 137 aaKnown RBP15.24■□□□□ 0.03
COL27A1-205ENST00000485397 SYS1Q8N2H4 156 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 ZNF565Q8N9K5 539 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 CNIH3Q8TBE1 160 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 PLPPR1Q8TBJ4 325 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 MRGPRDQ8TDS7 321 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
COL27A1-205ENST00000485397 NOL4LQ96MY1 436 aaPredicted RBP15.24■□□□□ 0.03
COL27A1-205ENST00000485397 ZNF649Q9BS31 505 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 AMBNQ9NP70 447 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 PSG11Q9UQ72 335 aa15.24■□□□□ 0.03
COL27A1-205ENST00000485397 AMMECR1Q9Y4X0 333 aaPredicted RBP15.24■□□□□ 0.03
COL27A1-205ENST00000485397 TRAV39A0A0B4J263 110 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 A0A1W2PPI3 338 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 SNTNA6NMZ2 147 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 IL1AP01583 271 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 C21orf33P30042 268 aaPredicted RBP15.23■□□□□ 0.03
COL27A1-205ENST00000485397 GNG10P50151 68 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 HES1Q14469 280 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 HNF4GQ14541 408 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 RSBN1Q5VWQ0 802 aaPredicted RBP15.23■□□□□ 0.03
COL27A1-205ENST00000485397 PXT1Q8NFP0 134 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 OR51A2Q8NGJ7 313 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 OR10K1Q8NGX5 313 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 OR5AK2Q8NH90 309 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 TSEN15Q8WW01 171 aaKnown RBP15.23■□□□□ 0.03
COL27A1-205ENST00000485397 BARHL1Q9BZE3 327 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 NCOR1P1Q9H4R4 102 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 PCDHB16Q9NRJ7 776 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 LINC00527Q9UJ94 153 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 DHDHQ9UQ10 334 aa15.23■□□□□ 0.03
COL27A1-205ENST00000485397 TMEM212A6NML5 194 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 NPIPB11E5RHQ5 1161 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 GABRPO00591 440 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 TMEM11P17152 192 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 ALDH3A2P51648 485 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 RPL23AP62750 156 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms