RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GLAP06280 429 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 FOLR2P14207 255 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 GNRHRP30968 328 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 PPP1CCP36873 323 aaKnown RBP12.78□□□□□ -0.36
ATG4B-220ENST00000482507 ISOC2Q96AB3 205 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 RGCCQ9H4X1 137 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 IL36RNQ9UBH0 155 aa12.78□□□□□ -0.36
ATG4B-220ENST00000482507 PTPRBP23467 1997 aa12.77□□□□□ -0.36
ATG4B-220ENST00000482507 MPPED1O15442 326 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.37
ATG4B-220ENST00000482507 HERV-K104P61576 105 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
ATG4B-220ENST00000482507 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM211Q6ICI0 200 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 SPSB4Q96A44 273 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 BOD1Q96IK1 185 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 GPR87Q9BY21 358 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 LUZP4Q9P127 313 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF391Q9UJN7 358 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 MGAQ8IWI9 3026 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 C3orf85A0A1B0GTC6 90 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 C7orf77A4D0Y5 90 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 FAM24AA6NFZ4 105 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 C21orf140B9A014 251 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 CCL2P13500 99 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 BCL3P20749 454 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 PAX6P26367 422 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 GLP1RP43220 463 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 C15orf54Q8N8G6 183 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 SYT3Q9BQG1 590 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 C1QTNF5Q9BXJ0 243 aa12.77□□□□□ -0.37
ATG4B-220ENST00000482507 EIF5A2Q9GZV4 153 aaKnown RBP12.77□□□□□ -0.37
ATG4B-220ENST00000482507 IGSF23A1L1A6 192 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 SNRPEP62304 92 aaKnown RBP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 C9orf135Q5VTT2 229 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM182Q6ZP80 229 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 EXTL1Q92935 676 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 SLAMF9Q96A28 289 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 ABHD14AQ9BUJ0 271 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 TRDCB7Z8K6 153 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 CYTIPO60759 359 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 PRH1P02810 166 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF44P15621 663 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 WT1P19544 449 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 FOXG1P55316 489 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 POLR2GP62487 172 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATG4B-220ENST00000482507 HERPUD1Q15011 391 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 ODF3L1Q8IXM7 274 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 FBXO7Q9Y3I1 522 aa12.76□□□□□ -0.37
ATG4B-220ENST00000482507 IGKV1D-13A0A0B4J2D9 117 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PPE3 182 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF503-AS2A6NEH8 195 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 A6NLC8 198 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 K7N7A8 449 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 NKX2-8O15522 239 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 SCTP09683 121 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 IGKV1-13P0DP09 117 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 GFRA1P56159 465 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 PCBD1P61457 104 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 CLINT1Q14677 625 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 ACER2Q5QJU3 275 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 COLCA1Q6ZS62 124 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 TBC1D26Q86UD7 250 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 COMMD1Q8N668 190 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 OR56B2PQ8NGI1 322 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 LILRB1Q8NHL6 650 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM171Q8WVE6 324 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 MAGT1Q9H0U3 335 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 PARPBPQ9NWS1 579 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 FBXO9Q9UK97 447 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-220ENST00000482507 BOD1L1Q8NFC6 3051 aa12.75□□□□□ -0.37
ATG4B-220ENST00000482507 A0A096LPE4 126 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PPH5 198 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PPZ6 126 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 RPL36A-HNRNPH2H7BZ11 118 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 PTAFRP25105 342 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 GDF1P27539 372 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 MEOX2P50222 304 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 CTAG1AP78358 180 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 CCL20P78556 96 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-220ENST00000482507 OR2C3Q8N628 320 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 Q8NFD4 153 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 FAM213BQ8TBF2 198 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 RARRES2Q99969 163 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM50AO95807 157 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 ACAA1P09110 424 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-220ENST00000482507 FOXO1Q12778 655 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms