RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 OR13C5Q8NGS8 318 aa14.23□□□□□ -0.13
COL9A3-212ENST00000481800 MMP27Q9H306 513 aa14.23□□□□□ -0.13
COL9A3-212ENST00000481800 PCDHB16Q9NRJ7 776 aa14.23□□□□□ -0.13
COL9A3-212ENST00000481800 PAK1IP1Q9NWT1 392 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-212ENST00000481800 DPM3Q9P2X0 92 aa14.23□□□□□ -0.13
COL9A3-212ENST00000481800 MGAM2Q2M2H8 2515 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 MEIKINA0A087WXM9 373 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 TRAV24A0A0B4J272 114 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 TRBV5-5A0A0J9YX44 114 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 FAM172BPA6NC97 362 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 MYL12BO14950 172 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 CDRT1O95170 752 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 GLP1RP43220 463 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 ARHGDIBP52566 201 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 PRRX1P54821 245 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 BDH1Q02338 343 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 PIGYQ3MUY2 71 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 CCBE1Q6UXH8 406 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-212ENST00000481800 BAIAP2L2Q6UXY1 529 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 AHSA2Q719I0 299 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 OSR2Q8N2R0 312 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 OR4P4Q8NGL7 312 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 CREB3L1Q96BA8 519 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 PPIL3Q9H2H8 161 aaKnown RBP14.22□□□□□ -0.13
COL9A3-212ENST00000481800 PSORS1C1Q9UIG5 152 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 ST3GAL6Q9Y274 331 aa14.22□□□□□ -0.13
COL9A3-212ENST00000481800 KBTBD11-OT1A0A1B0GTJ5 212 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 PNMA8CA0A1B0GUJ8 204 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 LEUTXA8MZ59 168 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 ZNF780AO75290 641 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-212ENST00000481800 VSIG10L2P0DP72 767 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 NFYBP25208 207 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 C21orf33P30042 268 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-212ENST00000481800 CEACAM3P40198 252 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 KCNJ3P48549 501 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 C2orf68Q2NKX9 166 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 KLHDC1Q8N7A1 406 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 Q8NFD4 153 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 ORAI1Q96D31 301 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 ZNF184Q99676 751 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-212ENST00000481800 PRSS22Q9GZN4 317 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 NCOR1P1Q9H4R4 102 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 DCLRE1BQ9H816 532 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 PLCXD1Q9NUJ7 323 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 IL36GQ9NZH8 169 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 KIF25Q9UIL4 384 aa14.21□□□□□ -0.13
COL9A3-212ENST00000481800 OR7C1O76099 320 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-212ENST00000481800 JUNBP17275 347 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-212ENST00000481800 IGFBP3P17936 291 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-212ENST00000481800 SERPINA2P20848 420 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 CD34P28906 385 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 BRS3P32247 399 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 GDNFP39905 211 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 WNT4P56705 351 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 ARSJQ5FYB0 599 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-212ENST00000481800 ZNF485Q8NCK3 441 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 CAPSLQ8WWF8 208 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 PGLYRP3Q96LB9 341 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 DPCDQ9BVM2 203 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-212ENST00000481800 ZNF702PQ9H963 129 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 ZNF286AQ9HBT8 521 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 CALYQ9NYX4 217 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 FOXJ3Q9UPW0 622 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 ERGIC3Q9Y282 383 aa14.2□□□□□ -0.14
COL9A3-212ENST00000481800 PEX14O75381 377 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 GPX5O75715 221 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 IGLV1-47P01700 117 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 CSF1P09603 554 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 CELP19835 753 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 RBM11P57052 281 aaKnown RBP14.19□□□□□ -0.14
COL9A3-212ENST00000481800 RPS11P62280 158 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL9A3-212ENST00000481800 GPR176Q14439 515 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 RBM39Q14498 530 aaKnown RBP14.19□□□□□ -0.14
COL9A3-212ENST00000481800 C17orf58Q2M2W7 97 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 NHLRC3Q5JS37 347 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 LAIR2Q6ISS4 152 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 LINC00596Q86U02 117 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 C11orf44Q8N8P7 122 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 SUMF2Q8NBJ7 301 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 OR13A1Q8NGR1 328 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 FBLIM1Q8WUP2 373 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 TFAP2CQ92754 450 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 OR14A2Q96R54 314 aa14.19□□□□□ -0.14
COL9A3-212ENST00000481800 A0A087X0M5 115 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 A0A1B0GX30 115 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 A0A1W2PPK0 400 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 BUB1B-PAK6H3BSN5 160 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 GTF2F2P13984 249 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 FSTP19883 344 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 HABP2Q14520 560 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-212ENST00000481800 HLA-DRB5Q30154 266 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 SLC22A6Q4U2R8 563 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 ATAD3CQ5T2N8 411 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 RSBN1Q5VWQ0 802 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-212ENST00000481800 NANOGP1Q8N7R0 232 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
COL9A3-212ENST00000481800 FAM110DQ8TAY7 271 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-212ENST00000481800 PLPPR1Q8TBJ4 325 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms