RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 LGALS12Q96DT0 336 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 METTL9Q9H1A3 318 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 LIN7BQ9HAP6 207 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 RHOFQ9HBH0 211 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 INPP5EQ9NRR6 644 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 SERTAD4Q9NUC0 356 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 PAK1IP1Q9NWT1 392 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-205ENST00000480127 TAS2R3Q9NYW6 316 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
COL17A1-205ENST00000480127 RPL36Q9Y3U8 105 aaKnown RBP5.69□□□□□ -1.5
COL17A1-205ENST00000480127 TSSC4Q9Y5U2 329 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-205ENST00000480127 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 DNAH3Q8TD57 4116 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 IRGMA1A4Y4 181 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 PSMB11A5LHX3 300 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 FAM90A8PA6NJQ4 464 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF729A6NN14 1252 aaPredicted RBP5.68□□□□□ -1.5
COL17A1-205ENST00000480127 SERPINE3A8MV23 424 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 KDM4BO94953 1096 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 OR2F2O95006 317 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 ISG15P05161 165 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 ALPLP05186 524 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 IGLL1P15814 213 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 TMEM11P17152 192 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 SERPINA2P20848 420 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 IL3RAP26951 378 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 MTNR1BP49286 362 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 DYNLT3P51808 116 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 DLX6P56179 175 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 SLC35B1P78383 322 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 BDH1Q02338 343 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 RAB40BQ12829 278 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 TPTE2P1Q5T6R2 138 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF691Q5VV52 312 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 UNQ9370/PRO34162Q6UXP9 181 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 SAXO1Q8IYX7 474 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 Q8N2B8 174 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 OR10K1Q8NGX5 313 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 OR10AC1Q8NH08 325 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 OR56B4Q8NH76 319 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 OR9G1Q8NH87 305 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 RFESDQ8TAC1 157 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 MRGPRDQ8TDS7 321 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 GPR148Q8TDV2 347 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 PELI1Q96FA3 418 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 MBOAT4Q96T53 435 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 PDCD1LG2Q9BQ51 273 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 GPR61Q9BZJ8 451 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 RAB9BQ9NP90 201 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 CALYQ9NYX4 217 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 KIF25Q9UIL4 384 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 MYRFQ9Y2G1 1151 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 MOB4Q9Y3A3 225 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 HSPE1-MOB4S4R3N1 261 aa5.68□□□□□ -1.5
COL17A1-205ENST00000480127 IGKV1-9A0A0C4DH69 117 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 KBTBD11-OT1A0A1B0GTJ5 212 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 WI2-2373I1.2A0A1W2PRP0 233 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 SH2D7A6NKC9 451 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 OOSP1A8MZH6 123 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 E9PQ18 207 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 BUB1B-PAK6H3BSN5 160 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 SLC33A1O00400 549 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 EBAG9O00559 213 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 NANOS3P60323 173 aaKnown RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 KRTAP10-11P60412 298 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 EFNB1P98172 346 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 HLA-DRB5Q30154 266 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 SLC22A6Q4U2R8 563 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 DDI2Q5TDH0 399 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 FDX2Q6P4F2 183 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 FOXRED2Q8IWF2 684 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 SYS1Q8N2H4 156 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 PRR18Q8N4B5 295 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 JAGN1Q8N5M9 183 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 C11orf42Q8N5U0 333 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 OR4P4Q8NGL7 312 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 CNIH3Q8TBE1 160 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 CCDC107Q8WV48 283 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 LEAP2Q969E1 77 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 MYDGFQ969H8 173 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 TMEM106AQ96A25 262 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 RBM14Q96PK6 669 aaKnown RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 WNT10AQ9GZT5 417 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 ISG20L2Q9H9L3 353 aaKnown RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 ZNF286AQ9HBT8 521 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 ERVK13-1Q9NX77 482 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 TAS2R4Q9NYW5 299 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 IDI2-AS1Q9NZ38 188 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 GNG12Q9UBI6 72 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 AASSQ9UDR5 926 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 ZMAT5Q9UDW3 170 aaKnown RBP5.67□□□□□ -1.5
COL17A1-205ENST00000480127 ST3GAL6Q9Y274 331 aa5.67□□□□□ -1.5
COL17A1-205ENST00000480127 PNMA8CA0A1B0GUJ8 204 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 LOC100130705A0A1B0GUX0 176 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 TMEM30CPA0ZSE6 113 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 OR4C45A6NMZ5 311 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 AIPO00170 330 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 CCRL2O00421 344 aa5.66□□□□□ -1.5
COL17A1-205ENST00000480127 SDCBPO00560 298 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms