RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 BAMBIQ13145 260 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 KLRD1Q13241 179 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 TAF9Q16594 264 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 TUSC1Q2TAM9 212 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 SUMF2Q8NBJ7 301 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 TSPAN14Q8NG11 270 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 NEK7Q8TDX7 302 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 ZFAND2BQ8WV99 257 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 C1orf147Q96MC9 270 aaPredicted RBP16.77■□□□□ 0.28
VARS-224ENST00000479051 SELENOIQ9C0D9 397 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 BANF2Q9H503 90 aa16.77■□□□□ 0.28
VARS-224ENST00000479051 ZMAT3Q9HA38 289 aaKnown RBP16.77■□□□□ 0.28
VARS-224ENST00000479051 AK6Q9Y3D8 172 aaKnown RBP16.77■□□□□ 0.28
VARS-224ENST00000479051 MEX3AA1L020 520 aaKnown RBP16.76■□□□□ 0.27
VARS-224ENST00000479051 NPFFO15130 113 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 SLC22A1O15245 554 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 DLX1P56177 255 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 DLX6P56179 175 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 PRB3Q04118 309 aaPredicted RBP16.76■□□□□ 0.27
VARS-224ENST00000479051 DEFB112Q30KQ8 113 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 SYT6Q5T7P8 510 aaPredicted RBP16.76■□□□□ 0.27
VARS-224ENST00000479051 OR13D1Q8NGV5 346 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 KCNG3Q8TAE7 436 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 CORO2AQ92828 525 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 FAM46BQ96A09 425 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 COQ2Q96H96 371 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 ZNF48Q96MX3 618 aaPredicted RBP16.76■□□□□ 0.27
VARS-224ENST00000479051 NCOR1P1Q9H4R4 102 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 TAS2R3Q9NYW6 316 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 STUB1Q9UNE7 303 aa16.76■□□□□ 0.27
VARS-224ENST00000479051 ATRQ13535 2644 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 MEIKINA0A087WXM9 373 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 TRAV1-2A0A0B4J238 106 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 SLC17A2O00624 439 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 CLPXO76031 633 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 BPNT1O95861 308 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 MPIG6BO95866 241 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 CD37P11049 281 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 SRSF2Q01130 221 aaKnown RBP16.75■□□□□ 0.27
VARS-224ENST00000479051 PAX5Q02548 391 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 RBM39Q14498 530 aaKnown RBP16.75■□□□□ 0.27
VARS-224ENST00000479051 RAB11BQ15907 218 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 ZNF782Q6ZMW2 699 aaPredicted RBP16.75■□□□□ 0.27
VARS-224ENST00000479051 TCF23Q7RTU1 214 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 C11orf42Q8N5U0 333 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 ZNF565Q8N9K5 539 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 TMEM104Q8NE00 496 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 SSR3Q9UNL2 185 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 SOX21Q9Y651 276 aaPredicted RBP16.75■□□□□ 0.27
VARS-224ENST00000479051 V9GY05 133 aa16.75■□□□□ 0.27
VARS-224ENST00000479051 DSCAML1Q8TD84 2053 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 A0A0U1RQK1 487 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 A0A1W2PRD5 423 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 A0A1W2PRF3 423 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 A0A1W2PRM7 423 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 MEIOCA2RUB1 952 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 MCRIP1C9JLW8 97 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 PAHP00439 452 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 FBP1P09467 338 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 IGHV1-8P0DP01 117 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 COX7A1P24310 79 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 LGALS4P56470 323 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 MIDNQ504T8 468 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 C22orf42Q6IC83 251 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 PIP4P2Q8N4L2 257 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 Q96M66 194 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 TMEM59Q9BXS4 323 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 PRDM13Q9H4Q3 707 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 SESN1Q9Y6P5 492 aa16.74■□□□□ 0.27
VARS-224ENST00000479051 MDFIC2A0A1B0GVS7 189 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 TMEM30CPA0ZSE6 113 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 DNAJC9-AS1A6NH13 148 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 ZNF729A6NN14 1252 aaPredicted RBP16.73■□□□□ 0.27
VARS-224ENST00000479051 VSIG8P0DPA2 414 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 ARSBP15848 533 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
VARS-224ENST00000479051 SAA4P35542 130 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 GLP1RP43220 463 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 RSBN1Q5VWQ0 802 aaPredicted RBP16.73■□□□□ 0.27
VARS-224ENST00000479051 SLC35E4Q6ICL7 350 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 OR52W1Q6IF63 320 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 PNKDQ8N490 385 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 ZDHHC22Q8N966 263 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 ZNF696Q9H7X3 374 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 RCC2Q9P258 522 aaKnown RBP16.73■□□□□ 0.27
VARS-224ENST00000479051 KIF25Q9UIL4 384 aa16.73■□□□□ 0.27
VARS-224ENST00000479051 CUBNO60494 3623 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 FUT3P21217 361 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 UBA52P62987 128 aaKnown RBP16.72■□□□□ 0.27
VARS-224ENST00000479051 P2RY14Q15391 338 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 KRTAP24-1Q3LI83 254 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 RAB12Q6IQ22 244 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 HCP5Q6MZN7 132 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 HEPN1Q6WQI6 88 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 Q6YL49 198 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 OR2W3Q7Z3T1 314 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 PLPPR1Q8TBJ4 325 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 FAM216AQ8WUB2 273 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 SLC25A28Q96A46 364 aa16.72■□□□□ 0.27
VARS-224ENST00000479051 GFI1Q99684 422 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms