RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NECAP2Q9NVZ3 263 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 COQ3Q9NZJ6 369 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ANXA10Q9UJ72 324 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 MCTS1Q9ULC4 181 aaKnown RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 PADI1Q9ULC6 663 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 BOKQ9UMX3 212 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SLC7A11Q9UPY5 501 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 IGKV3D-15A0A087WSY6 115 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 A0A0G2JMM0 328 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF816-ZNF321PA0A0X1KG74 233 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 hCG_38984A0A1B0GV85 526 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 A0A1W2PPB8 328 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM230AA0A1W2PPH8 454 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 A0A1W2PRS3 328 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A10PA6NDY2 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 KIR3DP1A8MWS1 328 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 PRSS44E7EML9 344 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 TSPAN4O14817 238 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 PDCD6O75340 191 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 TRAPPC6AO75865 159 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 NRASP01111 189 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 APOC3P02656 99 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 GAPDHP04406 335 aaKnown RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 SFTPBP07988 381 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FCGR3AP08637 254 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 HOXB5P09067 269 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FTH1P19P0C7X4 201 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF728P0DKX0 622 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR5H8P0DN80 308 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 B4GALT1P15291 398 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 TCN2P20062 427 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 TNFSF4P23510 183 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 GDF1P27539 372 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 GLP1RP43220 463 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 CYB561P49447 251 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 UCP3P55916 312 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 S100A10P60903 97 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 RAB1AP62820 205 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAM3AP98173 230 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 PSG4Q00888 419 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 DEFA5Q01523 94 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 Q0VFX4 171 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 RAB32Q13637 225 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 CEACAM16Q2WEN9 425 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 SMUG1Q53HV7 270 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ACER2Q5QJU3 275 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 PLCXD3Q63HM9 321 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 DHRS11Q6UWP2 260 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM200AQ86VY9 491 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OSR2Q8N2R0 312 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR2C3Q8N628 320 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 CCDC71LQ8N9Z2 235 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 BPIFCQ8NFQ6 507 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR5T2Q8NGG2 359 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR2AE1Q8NHA4 323 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 AKR7LQ8NHP1 331 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 MAFIPQ8WZ33 124 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ROBO4Q8WZ75 1007 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 SPSB4Q96A44 273 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 RRNAD1Q96FB5 475 aaKnown RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 GALNT14Q96FL9 552 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 LRRC46Q96FV0 321 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR10C1Q96KK4 312 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FAAP24Q9BTP7 215 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 DDA1Q9BW61 102 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 SUCNR1Q9BXA5 334 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 NKX6-2Q9C056 277 aaPredicted RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 SLC5A7Q9GZV3 580 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 MS4A7Q9GZW8 240 aaPredicted RBP4.25□□□□□ -1.73
SF3B6-202ENST00000478050 WNT5BQ9H1J7 359 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 NAA60Q9H7X0 242 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 PLEKHA2Q9HB19 425 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 C12orf4Q9NQ89 552 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ZC4H2Q9NQZ6 224 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 OR5AC2Q9NZP5 309 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 ABI3Q9P2A4 366 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 B4GALT7Q9UBV7 327 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 AK3Q9UIJ7 227 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 KCNIP3Q9Y2W7 256 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 LOXL2Q9Y4K0 774 aa4.25□□□□□ -1.73
SF3B6-202ENST00000478050 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 FLNCQ14315 2725 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 ESPL1Q14674 2120 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 IGKV1-27A0A075B6S5 117 aa4.24□□□□□ -1.73
SF3B6-202ENST00000478050 IGKV1D-8A0A087WSZ0 117 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms