RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 A6NDX4 124 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 TIMM23O14925 209 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 CHST1O43916 411 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 IGLV1-47P01700 117 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 CDK2P24941 298 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 EFNB2P52799 333 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 ATXN7L3Q14CW9 347 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-211ENST00000477612 FAM189A2Q15884 450 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 C17orf58Q2M2W7 97 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 C11orf88Q6PI97 169 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 CCBE1Q6UXH8 406 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-211ENST00000477612 CDH26Q8IXH8 852 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 ABHD12Q8N2K0 398 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 OR10K1Q8NGX5 313 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 NR1H4Q96RI1 486 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-211ENST00000477612 FAM192AQ9GZU8 254 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 METTL9Q9H1A3 318 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 PPIL3Q9H2H8 161 aaKnown RBP17.54■□□□□ 0.4
COL9A3-211ENST00000477612 LINC00574Q9H8X3 128 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 PAK1IP1Q9NWT1 392 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-211ENST00000477612 FOXJ3Q9UPW0 622 aa17.54■□□□□ 0.4
COL9A3-211ENST00000477612 MYL12BO14950 172 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF780AO75290 641 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-211ENST00000477612 CDRT1O95170 752 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 HTR3BO95264 441 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 HTR1DP28221 377 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 GABRA5P31644 462 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 GDNFP39905 211 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 RAB13P51153 203 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 BDH1Q02338 343 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 DOC2BQ14184 412 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 PIGYQ3MUY2 71 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 PAN3Q58A45 887 aaKnown RBP17.53■□□□□ 0.4
COL9A3-211ENST00000477612 PRAMEF5Q5TYX0 476 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 BAIAP2L2Q6UXY1 529 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 OSR2Q8N2R0 312 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF565Q8N9K5 539 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF596Q8TC21 504 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 NRG4Q8WWG1 115 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ZNF184Q99676 751 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-211ENST00000477612 NKX3-1Q99801 234 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-211ENST00000477612 BARHL1Q9BZE3 327 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ABCB10Q9NRK6 738 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 PITPNC1Q9UKF7 332 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ING4Q9UNL4 249 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 ST3GAL6Q9Y274 331 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 VWFP04275 2813 aa17.53■□□□□ 0.4
COL9A3-211ENST00000477612 TRAV8-7A0A075B6U6 113 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 KBTBD11-OT1A0A1B0GTJ5 212 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 FAM90A22PA8MWA6 464 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 CDK1P06493 297 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 CELP19835 753 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 C6orf141Q5SZD1 244 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 RSBN1Q5VWQ0 802 aaPredicted RBP17.52■□□□□ 0.4
COL9A3-211ENST00000477612 LINC00596Q86U02 117 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 LYPD6Q86Y78 171 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 OR4D6Q8NGJ1 314 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 OR4C13Q8NGP0 309 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 OR14A2Q96R54 314 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 PCDHB16Q9NRJ7 776 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 DPM3Q9P2X0 92 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 CKLFQ9UBR5 152 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 ERGIC3Q9Y282 383 aa17.52■□□□□ 0.4
COL9A3-211ENST00000477612 TET2Q6N021 2002 aaPredicted RBP17.52■□□□□ 0.39
COL9A3-211ENST00000477612 MAGEA13PA6NCF6 341 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 CSTBP04080 98 aaKnown RBP17.51■□□□□ 0.39
COL9A3-211ENST00000477612 RBM11P57052 281 aaKnown RBP17.51■□□□□ 0.39
COL9A3-211ENST00000477612 MPV17LQ2QL34 196 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 PLA1AQ53H76 456 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 Q8N2B8 174 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 THRSPQ92748 146 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 DERL3Q96Q80 235 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 S100A13Q99584 98 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 ZNF286AQ9HBT8 521 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 TCF7L1Q9HCS4 588 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 KIF25Q9UIL4 384 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 HILPDAQ9Y5L2 63 aa17.51■□□□□ 0.39
COL9A3-211ENST00000477612 NPIPB11E5RHQ5 1161 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 PIN1P1O15428 100 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 GPR176Q14439 515 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 OR13A1Q8NGR1 328 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 OR2T6Q8NHC8 308 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 NDNFQ8TB73 568 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 PLPPR1Q8TBJ4 325 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 KIRREL1Q96J84 757 aa17.5■□□□□ 0.39
COL9A3-211ENST00000477612 MEIKINA0A087WXM9 373 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 M0QZ24 198 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 HSPB6O14558 160 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 AQP4P55087 323 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 GABPB1Q06547 395 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-211ENST00000477612 HLA-DRB5Q30154 266 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 UNQ9370/PRO34162Q6UXP9 181 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 SUMF2Q8NBJ7 301 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 OR10A7Q8NGE5 316 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 CREB3L1Q96BA8 519 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 MRPS24Q96EL2 167 aaKnown RBP17.49■□□□□ 0.39
COL9A3-211ENST00000477612 DPCDQ9BVM2 203 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-211ENST00000477612 ZNF702PQ9H963 129 aa17.49■□□□□ 0.39
COL9A3-211ENST00000477612 ING3Q9NXR8 418 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms