RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 NKX2-8O15522 239 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 SYNGR1O43759 233 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 SCTP09683 121 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 RNPS1Q15287 305 aaKnown RBP9.57□□□□□ -0.88
COL27A1-204ENST00000477421 ADIRFQ15847 76 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 GUK1Q16774 197 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 IZUMO4Q1ZYL8 232 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 HSD17B13Q7Z5P4 300 aaPredicted RBP9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PAQR4Q8N4S7 273 aaPredicted RBP9.57□□□□□ -0.88
COL27A1-204ENST00000477421 SHARPINQ9H0F6 387 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 DYNLRB1Q9NP97 96 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 TMEM100Q9NV29 134 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 CACNG5Q9UF02 275 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 MMP24Q9Y5R2 645 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 TICRRQ7Z2Z1 1910 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 MPPED1O15442 326 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 KLK10O43240 276 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL27A1-204ENST00000477421 IGHMP01871 453 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 HEXAP06865 529 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 OR3A1P47881 315 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF718Q3SXZ3 478 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 NHLRC3Q5JS37 347 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PRAMEF5Q5TYX0 476 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PRAMEF6Q5VXH4 476 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 MRGPRDQ8TDS7 321 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 NMES1Q9C002 83 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF391Q9UJN7 358 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 TMED3Q9Y3Q3 217 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 KPTNQ9Y664 436 aa9.57□□□□□ -0.88
COL27A1-204ENST00000477421 RNF212BA8MTL3 300 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 SELEP16581 610 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 BMP5P22003 454 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 CLRN3Q8NCR9 226 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 OR4A16Q8NH70 328 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 ABHD5Q8WTS1 349 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 IMMP1LQ96LU5 166 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF107Q9UII5 783 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 PROCRQ9UNN8 238 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 USF3Q68DE3 2245 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 NOTCH3Q9UM47 2321 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 CLEC18AA5D8T8 446 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 LINC01387J3KSC0 135 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 KLF7O75840 302 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 PPP1CBP62140 327 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 VAX1Q5SQQ9 334 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 TIPARPQ7Z3E1 657 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 MDP1Q86V88 176 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 FAM185AQ8N0U4 392 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 CLEC18CQ8NCF0 446 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 LHX4Q969G2 390 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 RPUSD4Q96CM3 377 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 OPA3Q9H6K4 179 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 PLEKHA3Q9HB20 300 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 UQCC1Q9NVA1 299 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 PCDH15Q96QU1 1955 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 CHST1O43916 411 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 DFFBO76075 338 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 IGFBP3P17936 291 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 TNFSF4P23510 183 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 SNCAP37840 140 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 RAB4BP61018 213 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 C4orf17Q53FE4 359 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 GALMQ96C23 342 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 C19orf12Q9NSK7 152 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 MFNGO00587 321 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 SCAF4O95104 1147 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 SP1P08047 785 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 PRF1P14222 555 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 NKX6-1P78426 367 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 EIF3IQ13347 325 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 TMEM105Q8N8V8 129 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 NECAP1Q8NC96 275 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 HPSE2Q8WWQ2 592 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 ERGIC1Q969X5 290 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 MRPS24Q96EL2 167 aaKnown RBP9.56□□□□□ -0.88
COL27A1-204ENST00000477421 WNT5BQ9H1J7 359 aa9.56□□□□□ -0.88
COL27A1-204ENST00000477421 B4E171 279 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 H7C1Q1 480 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 CD74P04233 296 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 ARG1P05089 322 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 RBM11P57052 281 aaKnown RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 RGS7BPQ6MZT1 257 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 BTNL3Q6UXE8 466 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 WFDC8Q8IUA0 241 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 PHYHIPLQ96FC7 376 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 ADGRG7Q96K78 797 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 GPR87Q9BY21 358 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 LPAR3Q9UBY5 353 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 TIMM8BQ9Y5J9 83 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 FAM74A7A6NL05 159 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms