RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ERVFC1-1P60608 527 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 DCAF10Q5QP82 559 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 Q6ZSR3 168 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 FAM57BQ71RH2 274 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 C1QL2Q7Z5L3 287 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF100Q8IYN0 542 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 OR5D18Q8NGL1 313 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 AGMATQ9BSE5 352 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 LIME1Q9H400 295 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
CLSTN1-205ENST00000477264 IGHV5-51A0A0C4DH38 117 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 XKRY2A2RUG3 117 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 IFNA1P01562 189 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 IGHG1P01857 330 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 FCGR2AP12318 317 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 TDGF1P3P51864 188 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 FAM3BP58499 235 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 HERV-K104P61576 105 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 COL10A1Q03692 680 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 OR8B8Q15620 311 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ACOT6Q3I5F7 207 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 PHLDA2Q53GA4 152 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 SLC23A3Q6PIS1 610 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 WDFY1Q8IWB7 410 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 CARFQ8N187 725 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 CALHM2Q9HA72 323 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 LRFN1Q9P244 771 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 CLEC18AA5D8T8 446 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 DHRS3O75911 302 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 DYNLT3P51808 116 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 CLEC18CQ8NCF0 446 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 PGAM5Q96HS1 289 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 WWTR1Q9GZV5 400 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ELL3Q9HB65 397 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF286AQ9HBT8 521 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 PCDH15Q96QU1 1955 aa13.22□□□□□ -0.29
CLSTN1-205ENST00000477264 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 TMEM210A6NLX4 147 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 MSTNO14793 375 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 APLNRP35414 380 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 FXYD4P59646 89 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 PRDX4Q13162 271 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 NAXEQ8NCW5 288 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 HDHD3Q9BSH5 251 aaPredicted RBP13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 GNG13Q9P2W3 67 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 COPS7AQ9UBW8 275 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 NAT8Q9UHE5 227 aa13.21□□□□□ -0.29
CLSTN1-205ENST00000477264 DLEU1O43261 78 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 PAX5Q02548 391 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 PMS2P11Q13670 270 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 WDR74Q6RFH5 385 aaPredicted RBP13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 CA5BP1Q8WTZ4 195 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM56Q96MV1 263 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 HIST1H2AAQ96QV6 131 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 CHRNA10Q9GZZ6 450 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM222Q9H0R3 208 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 GAB2Q9UQC2 676 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 B3GALT1Q9Y5Z6 326 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 ARID1AO14497 2285 aa13.21□□□□□ -0.3
CLSTN1-205ENST00000477264 UNC13CQ8NB66 2214 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 PIGBOS1A0A0B4J2F0 54 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 C3orf85A0A1B0GTC6 90 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 SSSCA1O60232 199 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 G0S2P27469 103 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 ASCL1P50553 236 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 UEVLDQ8IX04 471 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 IL22RA1Q8N6P7 574 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 OR2V1Q8NHB1 315 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 MBD3L1Q8WWY6 194 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 OR5B12Q96R08 314 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 Q9N2K0 584 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 IFNA5P01569 189 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF25P17030 456 aaPredicted RBP13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 NUBP1P53384 320 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms