RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GINS4Q9BRT9 223 aa24.16■■□□□ 1.46
VEGFA-211ENST00000476772 RIMS4Q9H426 269 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-211ENST00000476772 ZNF222Q9UK12 451 aa24.16■■□□□ 1.46
VEGFA-211ENST00000476772 FLVCR2Q9UPI3 526 aa24.16■■□□□ 1.46
VEGFA-211ENST00000476772 A0A0B4J293 547 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 ARPC4P59998 168 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 ZNF497Q6ZNH5 498 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 C17orf107Q6ZR85 190 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 DTX2Q86UW9 622 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 ANGPTL6Q8NI99 470 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 UBTD1Q9HAC8 227 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 SEBOXQ9HB31 216 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-211ENST00000476772 TMEM106BQ9NUM4 274 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 SLC2A8Q9NY64 477 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 EHFQ9NZC4 300 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 SCP2D1Q9UJQ7 156 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 TMEM178BH3BS89 294 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 SDCBPO00560 298 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-211ENST00000476772 H2AFB2P0C5Z0 115 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 OR3A1P47881 315 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 ASCC1Q8N9N2 400 aaKnown RBP24.15■■□□□ 1.46
VEGFA-211ENST00000476772 DEFB108BQ8NET1 73 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 PRRT1Q99946 306 aa24.15■■□□□ 1.46
VEGFA-211ENST00000476772 MYO18BQ8IUG5 2567 aa24.14■■□□□ 1.46
VEGFA-211ENST00000476772 HRNRQ86YZ3 2850 aaPredicted RBP24.14■■□□□ 1.46
VEGFA-211ENST00000476772 TRBV6-6A0A0A6YYG2 114 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 IGHV1-69-2A0A0G2JMI3 117 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 FUOMA2VDF0 154 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 OOEPA6NGQ2 149 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 CDK10Q15131 360 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 TEX36Q5VZQ5 186 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 STUMQ69YW2 141 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 OVCH2Q7RTZ1 564 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 C1orf87Q8N0U7 546 aa24.14■■□□□ 1.45
VEGFA-211ENST00000476772 TRAF4Q9BUZ4 470 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-211ENST00000476772 FBXO9Q9UK97 447 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-211ENST00000476772 UBR5O95071 2799 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-211ENST00000476772 ARPC1BO15143 372 aaKnown RBP24.13■■□□□ 1.45
VEGFA-211ENST00000476772 BCAP31P51572 246 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 SRSF7Q16629 238 aaKnown RBP eCLIP24.13■■□□□ 1.457e-11■□□□□ 10.2
VEGFA-211ENST00000476772 Q6ZS49 121 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 CADM3Q8N126 398 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 GAPTQ8N292 157 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 OR13C8Q8NGS7 320 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 SPOCK3Q9BQ16 436 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 SHARPINQ9H0F6 387 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 RAI1Q7Z5J4 1906 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-211ENST00000476772 FAM208BQ5VWN6 2430 aa24.13■■□□□ 1.45
VEGFA-211ENST00000476772 ZNF737O75373 536 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 GSTT2P0CG29 244 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 BTG1P62324 171 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 ZMYND11Q15326 602 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 TATDN3Q17R31 274 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 ZNF880Q6PDB4 577 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 ARRDC1Q8N5I2 433 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 LAMP3Q9UQV4 416 aa24.12■■□□□ 1.45
VEGFA-211ENST00000476772 GOSR1O95249 250 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 MUC1P15941 1255 aaPredicted RBP24.11■■□□□ 1.45
VEGFA-211ENST00000476772 TSPAN5P62079 268 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 C5orf24Q7Z6I8 188 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 CCDC107Q8WV48 283 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 DSCAMO60469 2012 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 GYPAP02724 150 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 KCNJ3P48549 501 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 MRGPRFQ96AM1 343 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 COQ2Q96H96 371 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 RAB1BQ9H0U4 201 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 NECAP2Q9NVZ3 263 aa24.11■■□□□ 1.45
VEGFA-211ENST00000476772 H7C1Q1 480 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 LGALS8O00214 317 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 RCC1P18754 421 aaPredicted RBP24.1■■□□□ 1.45
VEGFA-211ENST00000476772 AESQ08117 197 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 GRK1Q15835 563 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 CARTPTQ16568 116 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 SNX22Q96L94 193 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 SLC25A21Q9BQT8 299 aaPredicted RBP24.1■■□□□ 1.45
VEGFA-211ENST00000476772 MAB21L2Q9Y586 359 aa24.1■■□□□ 1.45
VEGFA-211ENST00000476772 PPIAL4EA0A075B759 164 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 TRAV39A0A0B4J263 110 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 TMEM30CPA0ZSE6 113 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 PPIAL4DF5H284 164 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 PPIAL4FP0DN26 164 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 RAG2P55895 527 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 ZNRF1Q8ND25 227 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 BEX2Q9BXY8 128 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 BEX1Q9HBH7 125 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 TRAPPC2LQ9UL33 140 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 PPIAL4AQ9Y536 164 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 ALG5Q9Y673 324 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 CHD6Q8TD26 2715 aa24.09■■□□□ 1.45
VEGFA-211ENST00000476772 TRDCB7Z8K6 153 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 PEX14O75381 377 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 DHFRP00374 187 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 SCTP09683 121 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 HFEQ30201 348 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 SLC35E4Q6ICL7 350 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 TMEM17Q86X19 198 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 SDSLQ96GA7 329 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 GAFA1Q96PS6 74 aa24.08■■□□□ 1.45
VEGFA-211ENST00000476772 TRAV38-1A0A0B4J264 116 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms