RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PLAC9Q5JTB6 97 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 Q6ZPA2 131 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 BPIFB2Q8N4F0 458 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 OR4M1Q8NGD0 313 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 PTX4Q96A99 478 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 PPA2Q9H2U2 334 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 RAB22AQ9UL26 194 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 SPATA2Q9UM82 520 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 MEX3AA1L020 520 aaKnown RBP11.86□□□□□ -0.51
CCNL1-217ENST00000476367 HSPB6O14558 160 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 DEGS1O15121 323 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 RAB6AP20340 208 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 EDDM3BP56851 147 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 PAX8Q06710 450 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 GDPD3Q7L5L3 318 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 SUMF2Q8NBJ7 301 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
CCNL1-217ENST00000476367 SNX22Q96L94 193 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 C19orf12Q9NSK7 152 aa11.86□□□□□ -0.51
CCNL1-217ENST00000476367 TRAV40A0A0B4J280 105 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A10PA6NDY2 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A18PA6NE21 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A16PA6NEW6 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A20PA6NIJ5 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A7PA6NKC0 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A22PA8MWA6 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A12PA8MX19 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A5PA8MXJ8 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A23PA8MXZ1 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 CSN2P05814 226 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 LIPFP07098 398 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A15PP0C7V4 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A13PP0C7W8 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A14PP0C7W9 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM90A24PP0C7X0 464 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 RORCP51449 518 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 SCAND1P57086 179 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 ARF6P62330 175 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 GRK1Q15835 563 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 OLFML2AQ68BL7 652 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 C6orf201Q7Z4U5 140 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 CROCCP3Q8IVE0 287 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 TPRX1Q8N7U7 411 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 DYRK2Q92630 601 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 FAM234AQ9H0X4 552 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 PCDHB16Q9NRJ7 776 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 ABRACLQ9P1F3 81 aa11.85□□□□□ -0.51
CCNL1-217ENST00000476367 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 TMEM127O75204 238 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 HOXB4P17483 251 aaPredicted RBP11.84□□□□□ -0.51
CCNL1-217ENST00000476367 VEGFCP49767 419 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
CCNL1-217ENST00000476367 PAX5Q02548 391 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 METTL11BQ5VVY1 283 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 CMTM4Q8IZR5 234 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 NANPQ8TBE9 248 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 DPCDQ9BVM2 203 aaPredicted RBP11.84□□□□□ -0.51
CCNL1-217ENST00000476367 NXF2Q9GZY0 626 aaKnown RBP11.84□□□□□ -0.51
CCNL1-217ENST00000476367 MIXL1Q9H2W2 232 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 ING3Q9NXR8 418 aa11.84□□□□□ -0.51
CCNL1-217ENST00000476367 ELF5Q9UKW6 265 aaPredicted RBP11.84□□□□□ -0.51
CCNL1-217ENST00000476367 CCDC160A6NGH7 325 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 PDCD6O75340 191 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 TOX4O94842 621 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 FUT3P21217 361 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 GLIPR1P48060 266 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 AESQ08117 197 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 ATXN7L3Q14CW9 347 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-217ENST00000476367 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-217ENST00000476367 RAB12Q6IQ22 244 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 GAPTQ8N292 157 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 C11orf42Q8N5U0 333 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 PPP1R35Q8TAP8 253 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
CCNL1-217ENST00000476367 ARHGAP5-AS1Q96IT6 56 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 FAAP24Q9BTP7 215 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 ABCG5Q9H222 651 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 RHBDL2Q9NX52 303 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 CCDC59Q9P031 241 aaKnown RBP11.83□□□□□ -0.52
CCNL1-217ENST00000476367 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 ETV7Q9Y603 341 aa11.83□□□□□ -0.52
CCNL1-217ENST00000476367 CTDSP2O14595 271 aa11.82□□□□□ -0.52
CCNL1-217ENST00000476367 EIF4EP06730 217 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms