RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 FOXD3Q9UJU5 478 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 CA14Q9ULX7 337 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 A0A0J9YW62 118 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 SYNGR3O43761 229 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 CCL3P10147 92 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 MDKP21741 143 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 PLA2G5P39877 138 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF266Q14584 549 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 RABEPKQ7Z6M1 372 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 ALKBH3Q96Q83 286 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 SRXN1Q9BYN0 137 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 CALHM2Q9HA72 323 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 CRLF2Q9HC73 371 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 ARHGAP21Q5T5U3 1957 aa11.66□□□□□ -0.54
ARHGEF39-203ENST00000475323 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 PITX3O75364 302 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 EDN3P14138 238 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF32P17041 273 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF92Q03936 586 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 WDR74Q6RFH5 385 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF818PQ6ZRF7 136 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 FOXL2NBQ6ZUU3 175 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 MAML2Q8IZL2 1156 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 CARFQ8N187 725 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 PLEKHF2Q9H8W4 249 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 TREM2Q9NZC2 230 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 KIAA1456Q9P272 454 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 WDFY4Q6ZS81 3184 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF587BE7ETH6 402 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 PDCD6O75340 191 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 TCN2P20062 427 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 MALLQ13021 153 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 CNN3Q15417 329 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 SSX2Q16385 188 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 FAM27BQ5VT28 67 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 SSX9Q7RTT3 188 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 GAPTQ8N292 157 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 CCDC71LQ8N9Z2 235 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 C10orf35Q96D05 121 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 LYRM2Q9NU23 88 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 CHD3Q12873 2000 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 FREM1Q5H8C1 2179 aa11.65□□□□□ -0.54
ARHGEF39-203ENST00000475323 CEP192Q8TEP8 1941 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 CXorf65A6NEN9 183 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 ZIC3O60481 467 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 SCTP09683 121 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 HOXA6P31267 233 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 RPL23AP62750 156 aaKnown RBP11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 VAMP2P63027 116 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 PLCXD3Q63HM9 321 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.55
ARHGEF39-203ENST00000475323 KIAA2026Q5HYC2 2103 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 CHST1O43916 411 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 UCP3P55916 312 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 KHDC3LQ587J8 217 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 ASCL4Q6XD76 172 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 SLC25A26Q70HW3 274 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 CLDND2Q8NHS1 167 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 ABHD5Q8WTS1 349 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 CDS2O95674 445 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 RBM11P57052 281 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 DEFA6Q01524 100 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 DPPA2Q7Z7J5 298 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 KMT5CQ86Y97 462 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 CMTM1Q8IZ96 169 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 FRZBQ92765 325 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 SIGLEC12Q96PQ1 595 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 PROK2Q9HC23 129 aa11.64□□□□□ -0.55
ARHGEF39-203ENST00000475323 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 FAM186AA6NE01 2351 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 HSPA12AO43301 675 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 HLA-HP01893 362 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 COX5BP10606 129 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 NR2C1P13056 603 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 MRPS34P82930 218 aaKnown RBP11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 GAMTQ14353 236 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 GUSBP11Q6P575 273 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 PLPPR1Q8TBJ4 325 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 CPNE4Q96A23 557 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 PRO1933Q9H354 126 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 GNG13Q9P2W3 67 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 FABP4P15090 132 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 FUT3P21217 361 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 PI4KAP42356 2102 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 GLIPR1P48060 266 aa11.63□□□□□ -0.55
ARHGEF39-203ENST00000475323 RPP30P78346 268 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms