RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OR2T29Q8NH02 315 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 Q8TCH9 128 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 PPCDCQ96CD2 204 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 DYNLL2Q96FJ2 89 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 GINS4Q9BRT9 223 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 MEPEQ9NQ76 525 aaPredicted RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 ZNF586Q9NXT0 402 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 ANXA10Q9UJ72 324 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 CES1P1Q9UKY3 287 aa2.97□□□□□ -1.93
UBR3-208ENST00000474426 LSM5Q9Y4Y9 91 aaKnown RBP2.97□□□□□ -1.93
UBR3-208ENST00000474426 FER1L6Q2WGJ9 1857 aa2.96□□□□□ -1.93
UBR3-208ENST00000474426 BAZ2AQ9UIF9 1905 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 ZCCHC11Q5TAX3 1644 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 ALKQ9UM73 1620 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 MCRIP1C9JLW8 97 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TNFRSF11BO00300 401 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TAX1BP3O14907 124 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TMEM225BP0DP42 221 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 VSIG10L2P0DP72 767 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ORM2P19652 201 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CD34P28906 385 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 OR10J1P30954 320 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TAS2R20P59543 309 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 SNRPNP63162 240 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 SLC35A2P78381 396 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 AKR1C1Q04828 323 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TRMT10BQ6PF06 316 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 GJC3Q8NFK1 279 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ADOQ96SZ5 270 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 HSD17B10Q99714 261 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 OR52D1Q9H346 318 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 SPANXB1Q9NS25 103 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 LYRM2Q9NU23 88 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 FAM206AQ9NX38 181 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 Q9UF83 564 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 MED1Q15648 1581 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 CCDC88CQ9P219 2028 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 H3BQ15 152 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CCL24O00175 119 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CD8AP01732 235 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 SLC35G6P0C7Q6 338 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 AADACP22760 399 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 PCBP4P57723 403 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 RPL27P61353 136 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 HSPE1P61604 102 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 GGTLC2Q14390 218 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 OR10K2Q6IF99 312 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TEX43Q6ZNM6 134 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 GTF2H5Q6ZYL4 71 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 HOGA1Q86XE5 327 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ZMYND19Q96E35 227 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 NDC1Q9BTX1 674 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 RPP25Q9BUL9 199 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 PBX4Q9BYU1 374 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TMEM222Q9H0R3 208 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 MED28Q9H204 178 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 APOBEC3GQ9HC16 384 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 PRTFDC1Q9NRG1 225 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 RLIMQ9NVW2 624 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 C1RLQ9NZP8 487 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 DNAJC27Q9NZQ0 273 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 RPS6KB2Q9UBS0 482 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CACFD1Q9UGQ2 172 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ZNF222Q9UK12 451 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 LSM4Q9Y4Z0 139 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 SIRT4Q9Y6E7 314 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 DOCK5Q9H7D0 1870 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 RICTORQ6R327 1708 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 HELZP42694 1942 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 IGHV1-69-2A0A0G2JMI3 117 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 FAM95CA0A1B0GW59 222 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 DUXBA0A1W2PPF3 345 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CEACAM18A8MTB9 384 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 H0YJW9 148 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TACSTD2P09758 323 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 CT45A10P0DMU9 189 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ERGP11308 486 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TACR1P25103 407 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ZNF140P52738 457 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 BACE1P56817 501 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ST3GAL1Q11201 340 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 BCL2L15Q5TBC7 163 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 HRCT1Q6UXD1 115 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 C8orf86Q6ZUL3 223 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 PLXDC1Q8IUK5 500 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.96□□□□□ -1.94
UBR3-208ENST00000474426 OR5P3Q8WZ94 311 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 PITX2Q99697 317 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 TM2D2Q9BX73 214 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 PRRG4Q9BZD6 226 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 ATG5Q9H1Y0 275 aa2.96□□□□□ -1.94
UBR3-208ENST00000474426 BORCS7-ASMTA0A0B4J1R7 106 aa2.95□□□□□ -1.94
UBR3-208ENST00000474426 C15orf61A6NNL5 157 aa2.95□□□□□ -1.94
UBR3-208ENST00000474426 FAM166BA8MTA8 275 aa2.95□□□□□ -1.94
UBR3-208ENST00000474426 YPEL1O60688 119 aa2.95□□□□□ -1.94
UBR3-208ENST00000474426 FAM106CPP0CH98 169 aa2.95□□□□□ -1.94
UBR3-208ENST00000474426 ZNF708P17019 499 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms