RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CD1AP06126 327 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 CGB3P0DN86 165 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 CGB7P0DN87 165 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 CELP19835 753 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 HTR1DP28221 377 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 DYNLT3P51808 116 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 WNT4P56705 351 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 ATXN7L3Q14CW9 347 aaPredicted RBP9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PIGYQ3MUY2 71 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PLA1AQ53H76 456 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PAN3Q58A45 887 aaKnown RBP9.03□□□□□ -0.96
CKS1B-206ENST00000474215 NHLRC3Q5JS37 347 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 C6orf141Q5SZD1 244 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 RTN4RL2Q86UN3 420 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 OSR2Q8N2R0 312 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF565Q8N9K5 539 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 OR4D6Q8NGJ1 314 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 NDNFQ8TB73 568 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 NRG4Q8WWG1 115 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 OR14A2Q96R54 314 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF184Q99676 751 aaPredicted RBP9.03□□□□□ -0.96
CKS1B-206ENST00000474215 NPFFR1Q9GZQ6 430 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PPIL3Q9H2H8 161 aaKnown RBP9.03□□□□□ -0.96
CKS1B-206ENST00000474215 NCOR1P1Q9H4R4 102 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PCDHB16Q9NRJ7 776 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 PAK1IP1Q9NWT1 392 aaPredicted RBP9.03□□□□□ -0.96
CKS1B-206ENST00000474215 ST3GAL6Q9Y274 331 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
CKS1B-206ENST00000474215 MGAM2Q2M2H8 2515 aa9.02□□□□□ -0.96
CKS1B-206ENST00000474215 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 KBTBD11-OT1A0A1B0GTJ5 212 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 PNMA8CA0A1B0GUJ8 204 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 A0A1W2PPK0 400 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 MEGF11A6BM72 1044 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 A6NDX4 124 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 ZNF729A6NN14 1252 aaPredicted RBP9.02□□□□□ -0.97
CKS1B-206ENST00000474215 PTGES3LE9PB15 166 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 M0QZ24 198 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 TIMM23O14925 209 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 CHST1O43916 411 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 ZNF780AO75290 641 aaPredicted RBP9.02□□□□□ -0.97
CKS1B-206ENST00000474215 FSTP19883 344 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 CD34P28906 385 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 GDNFP39905 211 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 KCNJ3P48549 501 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 BDH1Q02338 343 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 RNLSQ5VYX0 342 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 C11orf88Q6PI97 169 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
CKS1B-206ENST00000474215 BAIAP2L2Q6UXY1 529 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 CDH26Q8IXH8 852 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 OR4P4Q8NGL7 312 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
CKS1B-206ENST00000474215 IFT22Q9H7X7 185 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 TCF7L1Q9HCS4 588 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 DPM3Q9P2X0 92 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 PITPNC1Q9UKF7 332 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 TCF19Q9Y242 345 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 SIGLEC9Q9Y336 463 aa9.02□□□□□ -0.97
CKS1B-206ENST00000474215 A0A087X0M5 115 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 A0A1B0GX30 115 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 MAGEA13PA6NCF6 341 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 H3BUI4 141 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 TOR1AO14656 332 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 GEMIN2O14893 280 aaKnown RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 OR7C1O76099 320 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 CDK1P06493 297 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 GTF2F2P13984 249 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 JUNBP17275 347 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 EFNB2P52799 333 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 PRRX1P54821 245 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 RBM11P57052 281 aaKnown RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 PAX5Q02548 391 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 GABPB1Q06547 395 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 DOC2BQ14184 412 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 GPR176Q14439 515 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 SLC22A6Q4U2R8 563 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 RSBN1Q5VWQ0 802 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 LINC00596Q86U02 117 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 TMEM219Q86XT9 240 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 JAGN1Q8N5M9 183 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 SUMF2Q8NBJ7 301 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 OR13A1Q8NGR1 328 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 OR2T6Q8NHC8 308 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 PLPPR1Q8TBJ4 325 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 THRSPQ92748 146 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 MYDGFQ969H8 173 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 CREB3L1Q96BA8 519 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 DERL3Q96Q80 235 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 DPCDQ9BVM2 203 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-206ENST00000474215 MND1Q9BWT6 205 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 LINC00574Q9H8X3 128 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 ZNF286AQ9HBT8 521 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 SCN3BQ9NY72 215 aa9.01□□□□□ -0.97
CKS1B-206ENST00000474215 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms