RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SLC43A2Q8N370 569 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF561Q8N587 486 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ACBD7Q8N6N7 88 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 UXS1Q8NBZ7 420 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NOXO1Q8NFA2 376 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC26A10Q8NG04 563 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR4M2Q8NGB6 313 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR11G2Q8NGC1 345 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR4M1Q8NGD0 313 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR51A2Q8NGJ7 313 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR2Y1Q8NGV0 311 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR6K6Q8NGW6 343 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR6N2Q8NGY6 317 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR2G2Q8NGZ5 317 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR8K3Q8NH51 312 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NEIL3Q8TAT5 605 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SETD6Q8TBK2 473 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRMT10AQ8TBZ6 339 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HAVCR2Q8TDQ0 301 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ST7LQ8TDW4 575 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 S100ZQ8WXG8 99 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C11orf40Q8WZ69 217 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ST8SIA1Q92185 356 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PSMF1Q92530 271 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CORO2AQ92828 525 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GHSRQ92847 366 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MR1Q95460 341 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 YIPF5Q969M3 257 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NABP1Q96AH0 204 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 UPRTQ96BW1 309 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A36Q96CQ1 311 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A38Q96DW6 304 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DTNBP1Q96EV8 351 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RBM18Q96H35 190 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KCTD7Q96MP8 289 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DERL3Q96Q80 235 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ALKBH3Q96Q83 286 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR8B4Q96RC9 309 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CCNL2Q96S94 520 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TEAD3Q99594 435 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KCNS3Q9BQ31 491 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ALKBH7Q9BT30 221 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MED18Q9BUE0 208 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ALG12Q9BV10 488 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC32Q9BV29 185 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EMC6Q9BV81 110 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EDEM2Q9BV94 578 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PRRG3Q9BZD7 231 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TBL1XR1Q9BZK7 514 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ULBP3Q9BZM4 244 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC19A3Q9BZV2 496 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TXNIPQ9H3M7 391 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 METTL7AQ9H8H3 244 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 WDR54Q9H977 334 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NOX3Q9HBY0 568 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HMG20AQ9NP66 347 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FANCFQ9NPI8 374 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TIGARQ9NQ88 270 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NANSQ9NR45 359 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 INPP5EQ9NRR6 644 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 INIPQ9NRY2 104 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DEPPQ9NTK1 212 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 DDX28Q9NUL7 540 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MED29Q9NX70 200 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLCO1C1Q9NYB5 712 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MRPL39Q9NYK5 338 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TAS2R5Q9NYW4 299 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TAS2R4Q9NYW5 299 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KLRF1Q9NZS2 232 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MED11Q9P086 117 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EXTL2Q9UBQ6 330 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KLK11Q9UBX7 282 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 Q9UF83 564 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PISDQ9UG56 409 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 GNG8Q9UK08 70 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FBXL3Q9UKT7 428 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SSR3Q9UNL2 185 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 B9D1Q9UPM9 204 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 BAIAP2Q9UQB8 552 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RASD1Q9Y272 281 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRAPPC4Q9Y296 219 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NSG2Q9Y328 171 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 AK6Q9Y3D8 172 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 UGT2A1Q9Y4X1 527 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PEX16Q9Y5Y5 336 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FKBP7Q9Y680 259 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LHFPL6Q9Y693 200 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 POMT1Q9Y6A1 747 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MAST4O15021 2626 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HYDINQ4G0P3 5121 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 KMT2AQ03164 3969 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PKD1L1Q8TDX9 2849 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SORL1Q92673 2214 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV18A0A075B6X5 111 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0A6YYD4 124 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NSG1A0A0A6YYJ2 146 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV1-2A0A0B4J238 106 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0J9YW62 118 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TRBV2A0A0J9YWF9 115 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms