RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ZNF529Q6P280 563 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 C10orf67Q8IYJ2 551 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 OR8H3Q8N146 312 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 OR51D1Q8NGF3 324 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 COQ2Q96H96 371 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 Q96MT0 163 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
CHD3-209ENST00000473376 IFT22Q9H7X7 185 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 ZNF286AQ9HBT8 521 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 ZFP57Q9NU63 452 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 MOB4Q9Y3A3 225 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 HSPE1-MOB4S4R3N1 261 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 H3BSH0 61 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 J3QLW9 94 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 FADS2O95864 444 aaKnown RBP10.77□□□□□ -0.69
CHD3-209ENST00000473376 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
CHD3-209ENST00000473376 TMEM225BP0DP42 221 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 IGLL1P15814 213 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 ZNF19P17023 458 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 ALDH3A2P51648 485 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 NHLRC3Q5JS37 347 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 ZFP1Q6P2D0 407 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 OR51A4Q8NGJ6 313 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 OR13C9Q8NGT0 318 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 CHPT1Q8WUD6 406 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 RPEQ96AT9 228 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 C4orf36Q96KX1 117 aa10.77□□□□□ -0.69
CHD3-209ENST00000473376 MRPS18AQ9NVS2 196 aaKnown RBP10.77□□□□□ -0.69
CHD3-209ENST00000473376 J3QR06 171 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 MAGEB3O15480 346 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 CIB2O75838 187 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 ZFPL1O95159 310 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 IL1AP01583 271 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 GABRB1P18505 474 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 GZMHP20718 246 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 RAB40BQ12829 278 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 MADCAM1Q13477 382 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 EBI3Q14213 229 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 Q3ZCU0 254 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 CCDC58Q4VC31 144 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 KLHL22Q53GT1 634 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 ZNF691Q5VV52 312 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 CNIH3Q8TBE1 160 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 LGALS12Q96DT0 336 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 IL36GQ9NZH8 169 aa10.76□□□□□ -0.69
CHD3-209ENST00000473376 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 H0YJX3 145 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 HCKP08631 526 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 RAB3AP20336 220 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 GDNFP39905 211 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 GP2P55259 537 aaKnown RBP10.75□□□□□ -0.69
CHD3-209ENST00000473376 SNU13P55769 128 aaKnown RBP10.75□□□□□ -0.69
CHD3-209ENST00000473376 VAX1Q5SQQ9 334 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 BAIAP2L2Q6UXY1 529 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 CCDC121Q6ZUS5 278 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 LINC00596Q86U02 117 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 OR52M1Q8NGK5 317 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 OR10AC1Q8NH08 325 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 OR5AK2Q8NH90 309 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 RHOXF1Q8NHV9 184 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 DPF1Q92782 380 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 TOMM40LQ969M1 308 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 RFT1Q96AA3 541 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 ZNF649Q9BS31 505 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 ALG8Q9BVK2 526 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 CALYQ9NYX4 217 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 IDI2-AS1Q9NZ38 188 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 DHDHQ9UQ10 334 aa10.75□□□□□ -0.69
CHD3-209ENST00000473376 MEIKINA0A087WXM9 373 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 TRAV24A0A0B4J272 114 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 A0A1W2PRX2 142 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 EI24O14681 340 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 IGHG2P01859 326 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 CALCBP10092 127 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 CD24P25063 80 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 OR3A4PP47883 348 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 GBX2P52951 348 aaPredicted RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 SCN1BQ07699 218 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 ATXN7L3Q14CW9 347 aaPredicted RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 PAN3Q58A45 887 aaKnown RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 RSBN1Q5VWQ0 802 aaPredicted RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 C5orf56Q8N8D9 126 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 OR5D18Q8NGL1 313 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 SPACA5Q96QH8 159 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 GON7Q9BXV9 100 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 PAK1IP1Q9NWT1 392 aaPredicted RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 ERVK13-1Q9NX77 482 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 PSG11Q9UQ72 335 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 RPL36Q9Y3U8 105 aaKnown RBP10.74□□□□□ -0.69
CHD3-209ENST00000473376 GMPPBQ9Y5P6 360 aa10.74□□□□□ -0.69
CHD3-209ENST00000473376 A0A1W2PPI3 338 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 SAC3D1A6NKF1 404 aa10.73□□□□□ -0.69
CHD3-209ENST00000473376 K7EIL1 84 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms