RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SIRT7Q9NRC8 400 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 IL36GQ9NZH8 169 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 CCDC59Q9P031 241 aaKnown RBP10.75□□□□□ -0.69
TPM3-216ENST00000473036 ONECUT1Q9UBC0 465 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 STEAP1Q9UHE8 339 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 NUP50Q9UKX7 468 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 ING4Q9UNL4 249 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
TPM3-216ENST00000473036 TRBV23-1A0A0A0MS06 115 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 RNASEK-C17orf49H0YIS7 233 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 VENTXO95231 258 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 HTR3BO95264 441 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 RPL31P62899 125 aaKnown RBP10.74□□□□□ -0.69
TPM3-216ENST00000473036 MXD1Q05195 221 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 KLRD1Q13241 179 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 RSU1Q15404 277 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 RAB11BQ15907 218 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 SFXN4Q6P4A7 337 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 GLIPR1L1Q6UWM5 242 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 FAM185AQ8N0U4 392 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 PNKDQ8N490 385 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 TMEM104Q8NE00 496 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 LHX4Q969G2 390 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 PTX4Q96A99 478 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 COQ2Q96H96 371 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 CST11Q9H112 138 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 METTL9Q9H1A3 318 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
TPM3-216ENST00000473036 AK6Q9Y3D8 172 aaKnown RBP10.74□□□□□ -0.69
TPM3-216ENST00000473036 GEMIN2O14893 280 aaKnown RBP10.73□□□□□ -0.69
TPM3-216ENST00000473036 SCGNO76038 276 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 ARSBP15848 533 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 SERPINA2P20848 420 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 GABRR1P24046 479 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 SCN1BQ07699 218 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 SPCS2Q15005 226 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 GRK1Q15835 563 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 SLC22A6Q4U2R8 563 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 METTL11BQ5VVY1 283 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
TPM3-216ENST00000473036 LINC00299Q6ZSB3 139 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 KIR3DL3Q8N743 410 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 KCNG3Q8TAE7 436 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 TBC1D15Q8TC07 691 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 DYNC2LI1Q8TCX1 351 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 SLC25A28Q96A46 364 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 DMRTB1Q96MA1 342 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 PPA2Q9H2U2 334 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 MMP27Q9H306 513 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 MRPS28Q9Y2Q9 187 aaKnown RBP10.73□□□□□ -0.69
TPM3-216ENST00000473036 ETV7Q9Y603 341 aa10.73□□□□□ -0.69
TPM3-216ENST00000473036 A0A075B6Q4 140 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 A0A1W2PQ09 198 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 SH2D1BO14796 132 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 DEGS1O15121 323 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 CSTBP04080 98 aaKnown RBP10.72□□□□□ -0.69
TPM3-216ENST00000473036 RBM11P57052 281 aaKnown RBP10.72□□□□□ -0.69
TPM3-216ENST00000473036 QRFPP83859 136 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 AESQ08117 197 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 EDDM3AQ14507 147 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 IL13RA2Q14627 380 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 NHLRC3Q5JS37 347 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 UTF1Q5T230 341 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 OR10K2Q6IF99 312 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 BRICD5Q6PL45 260 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 C1orf122Q6ZSJ8 110 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 OR2W3Q7Z3T1 314 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 OSR2Q8N2R0 312 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 NDNFQ8TB73 568 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 RNF167Q9H6Y7 350 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 UNKLQ9H9P5 680 aaKnown RBP10.72□□□□□ -0.69
TPM3-216ENST00000473036 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
TPM3-216ENST00000473036 FBLN5Q9UBX5 448 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 GLS2Q9UI32 602 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 DAPK2Q9UIK4 370 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 ADAM30Q9UKF2 790 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 RABL2BQ9UNT1 228 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 ST3GAL6Q9Y274 331 aa10.72□□□□□ -0.69
TPM3-216ENST00000473036 IGHV1-69DA0A0B4J2H0 117 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 METTL21EPA6NDL7 271 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 C17orf98A8MV24 154 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 M0R1W7 72 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 HSPB6O14558 160 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 MMP23AO75900 390 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 IGHV1-69P01742 117 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 ZNF44P15621 663 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 PRTN3P24158 256 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 GLIPR1P48060 266 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 EDDM3BP56851 147 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 ATXN7L3Q14CW9 347 aaPredicted RBP10.71□□□□□ -0.69
TPM3-216ENST00000473036 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 IDNKQ5T6J7 187 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 AWAT2Q6E213 333 aa10.71□□□□□ -0.69
TPM3-216ENST00000473036 SIGIRRQ6IA17 410 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms